ArticleAMB Express2018
Microbial community and diversity in the feces of Sichuan takin (Budorcas taxicolor tibetana) as revealed by Illumina Miseq sequencing and quantitative real-time PCR.
Article in AMB Express, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed, 11 citations in OpenAlex.
- Analysis of parasite communities and potentially pathogenic parasites in wild takin (Frontiers in veterinary science · 2025Article
- Analysis of fungal diversity in the gut feces of wild takin (Frontiers in microbiology · 2024Article
- Analysis of the microbial diversity in takin (Frontiers in microbiology · 2023Article
- Seasonal shift in gut microbiome diversity in wild Sichuan takin (Computational and structural biotechnology journal · 2023Article
- Consuming Different Structural Parts of Bamboo Induce Gut Microbiome Changes in Captive Giant Pandas.Current microbiology · 2021Article
- Harnessing the strategy of metagenomics for exploring the intestinal microecology of sable (Martes zibellina), the national first-level protected animal.AMB Express · 2020Article
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Authors and funding
7 authors at 2 institutions in 1 country.
Funding
Abstract
The Sichuan takin (Budorcas taxicolor tibetana) is a rare and endangered ruminant distributed in the eastern Himalayas. However, little information is available regarding the intestinal microbiota of the takin. In this study, Illumina Miseq platform targeting the V4 region of the 16S rRNA was employed to characterize microbial community and diversity in the feces of wild (n = 6) and captive takins (n = 6). The takin exhibited an intestinal microbiota dominated by three phyla: Firmicutes (57.4%), Bacteroidetes (24.2%) and Proteobacteria (12.3%). At family/genus level, Ruminococcaceae, Bacteroidaceae, Acinetobacter, Clostridium, Lachnospiraceae, Rikenellaceae, Bacillus, Comamonas and Spirochaetaceae were dominant. Distinctive microbiotas between wild and captive takins were observed based on microbial community structure, captive takins having significantly higher community diversity. Quantitative real-time PCR were also utilized to monitor predominant bacteria in three Sichuan takin individuals housed in Chengdu Zoo over a half-year period, which showed that microbial communities of the three takins were relatively similar to each other and stable during our study period. Our results suggested that diet was a major driver for shaping microbial community composition.
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Registered trials
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