Evidence map›Paper›PMID 29703991›Full record

ArticleScientific reports2018

Development of a Click-Chemistry Reagent Compatible with Mass Cytometry.

Jessica Shaklee, Kriti Srivastava, Heather Brown, Edgar A Arriaga, Valerie C Pierre, Jop H van Berlo

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. CyTOFFrontiers in immunology · 2022
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jessica ShakleeDepartment of Medicine, Cardiovascular Division, University of Minnesota, Minneapolis, MN, United States.
Kriti SrivastavaDepartment of Chemistry, University of Minnesota, Minneapolis, MN, United States.
Heather BrownDepartment of Chemistry, University of Minnesota, Minneapolis, MN, United States.
Edgar A ArriagaDepartment of Chemistry, University of Minnesota, Minneapolis, MN, United States.
Valerie C PierreDepartment of Chemistry, University of Minnesota, Minneapolis, MN, United States.
Jop H van BerloDepartment of Medicine, Cardiovascular Division, University of Minnesota, Minneapolis, MN, United States. jvanberl@umn.edu.ORCID 0000-0001-9229-4429
University of Minnesota · US

Funding

Strategic activation of endogenous c-kit+ progenitor cells for cardiac regenerationR01HL130072 · NHLBI · UNIVERSITY OF MINNESOTA · PI VAN BERLO, JOHANNES (JOP) · 2016 to 2020
$1.9M
Functional relevance of cardiac regeneration by c-kit positive stem cellsR00HL112852 · NHLBI · UNIVERSITY OF MINNESOTA · PI VAN BERLO, JOHANNES (JOP) · 2013 to 2015
$712k
Functional relevance of cardiac regeneration by c-kit positive stem cellsK99HL112852 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI VAN BERLO, JOHANNES (JOP) · 2012 to 2013
$263k
NHLBI NIH HHS K99 HL112852NHLBI NIH HHS R00 HL112852NHLBI NIH HHS R01 HL130072
6 · The paper itself

Abstract

The recent development of mass cytometry has allowed simultaneous detection of 40 or more unique parameters from individual single cells. While similar to flow cytometry, which is based on detection of fluorophores, one key distinguishing feature of mass cytometry is the detection of atomic masses of lanthanides by mass spectrometry in a mass cytometer. Its superior mass resolution results in lack of signal overlap, thereby allowing multiparametric detection of molecular features in each single cell greater than that of flow cytometry, which is limited to 20 parameters. Unfortunately, most detection in mass cytometry relies on lanthanide-tagged antibodies, which is ideal to detect proteins, but not other types of molecular features. To further expand the repertoire of molecular features that are detectable by mass cytometry, we developed a lanthanide-chelated, azide-containing probe that allows click-chemistry mediated labeling of target molecules. Following incorporation of the thymidine analog 5-ethynyl-2'-deoxyuridine (EdU) during DNA synthesis in S-phase of the cell cycle, we demonstrate that the probe introduced here, tagged with Terbium-159 (

Indexed as

AzidesChelating AgentsClick ChemistryCytological TechniquesHeLa CellsHumansIndicators and ReagentsLanthanoid Series ElementsMass SpectrometrySingle-Cell AnalysisStaining and LabelingTerbiumAzidesChelating AgentsIndicators and ReagentsLanthanoid Series ElementsTerbium

Identifiers

PMID29703991
PMCPMC5923286
OpenAlexW2805609990

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.