Evidence map›Paper›PMID 29703953›Full record

ArticleNature communications2018

Structural analysis of human ARS2 as a platform for co-transcriptional RNA sorting.

Wiebke Manuela Schulze, Frank Stein, Mandy Rettel, Max Nanao, Stephen Cusack

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Wiebke Manuela SchulzeEuropean Molecular Biology Laboratory, Grenoble Outstation, 71 Avenue des Martyrs, CS 90181, Grenoble Cedex 9, 38042, France.
Frank SteinEuropean Molecular Biology Laboratory, Heidelberg, Meyerhofstraße 1, Heidelberg, 69117, Germany.
Mandy RettelEuropean Molecular Biology Laboratory, Heidelberg, Meyerhofstraße 1, Heidelberg, 69117, Germany.
Max NanaoEuropean Molecular Biology Laboratory, Grenoble Outstation, 71 Avenue des Martyrs, CS 90181, Grenoble Cedex 9, 38042, France.
Stephen CusackEuropean Molecular Biology Laboratory, Grenoble Outstation, 71 Avenue des Martyrs, CS 90181, Grenoble Cedex 9, 38042, France. cusack@embl.fr.ORCID http://orcid.org/0000-0002-9324-0796
European Molecular Biology Laboratory · DEEuropean Molecular Biology Laboratory · FREuropean Synchrotron Radiation Facility · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ARS2 is a highly conserved metazoan protein involved in numerous aspects of nuclear RNA metabolism. As a direct partner of the nuclear cap-binding complex (CBC), it mediates interactions with diverse RNA processing and transport machineries in a transcript-dependent manner. Here, we present the human ARS2 crystal structure, which exhibits similarities and metazoan-specific differences to the plant homologue SERRATE, most notably an additional RRM domain. We present biochemical, biophysical and cellular interactome data comparing wild type and mutant ARS2 that identify regions critical for interactions with FLASH (involved in histone mRNA biogenesis), NCBP3 (a putative cap-binding protein involved in mRNA export) and single-stranded RNA. We show that FLASH and NCBP3 have overlapping binding sites on ARS2 and that CBC-ARS2-NCBP3 form a ternary complex that is mutually exclusive with CBC-ARS-PHAX (involved in snRNA export). Our results support that mutually exclusive higher-order CBC-ARS2 complexes are critical in determining Pol II transcript fate.

Indexed as

AnimalsApoptosis Regulatory ProteinsBinding SitesCalcium-Binding ProteinsCrystallography, X-RayHumansNuclear Cap-Binding Protein ComplexNuclear ProteinsProtein DomainsRecombinant ProteinsRNA, MessengerRNA Polymerase IIRNA, Small NuclearRNA TransportTranscription, GeneticApoptosis Regulatory ProteinsCalcium-Binding ProteinsCASP8AP2 protein, humanNuclear Cap-Binding Protein ComplexNuclear ProteinsRecombinant ProteinsRNA, MessengerRNA Polymerase IIRNA, Small NuclearSRRT protein, human

Identifiers

PMID29703953
PMCPMC5923425
OpenAlexW2801582631

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.