Evidence map›Paper›PMID 29703886›Full record

ArticleNature communications2018

Plasma cell differentiation is controlled by multiple cell division-coupled epigenetic programs.

Christopher D Scharer, Benjamin G Barwick, Muyao Guo, Alexander P R Bally, Jeremy M Boss

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed, 1 pooled it
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 1 synthesis or guideline pooled it, 125 citations in OpenAlex.

  1. Pooled it
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  18. EZH2 coordinates memory B-cell programming and recall responses.Journal of immunology (Baltimore, Md. : 1950) · 2025
    Article
  19. Oncotarget · 2025
    Article
  20. Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Christopher D ScharerDepartment of Microbiology and Immunology, Emory University, Atlanta, GA, 30322, USA. cdschar@emory.edu.ORCID http://orcid.org/0000-0001-7716-8504
Benjamin G BarwickDepartment of Microbiology and Immunology, Emory University, Atlanta, GA, 30322, USA.ORCID http://orcid.org/0000-0001-9810-3566
Muyao GuoDepartment of Microbiology and Immunology, Emory University, Atlanta, GA, 30322, USA.
Alexander P R BallyDepartment of Microbiology and Immunology, Emory University, Atlanta, GA, 30322, USA.
Jeremy M BossDepartment of Microbiology and Immunology, Emory University, Atlanta, GA, 30322, USA. jmboss@emory.edu.
Emory University · USCentral South University · CN

Funding

Regulation of Pathogenic Plasma Cells in Human SLEP01AI125180 · NIAID · EMORY UNIVERSITY · PI Ignacio E. Sanz · 2016 to 2026
$28.2M
Epigenetic Regulation of Plasma Cells DifferentiationR01AI123733 · NIAID · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 2016 to 2020
$1.9M
Epigenetic Programming of B cell Terminal DifferentiationF31AI112261 · NIAID · EMORY UNIVERSITY · PI BARWICK, BENJAMIN GABRIEL · 2014 to 2016
$120k
NIAID NIH HHS F31 AI112261NIAID NIH HHS R01 AI123733NIH HHS P01 AI125180NIH HHS R01 AI123733NIH HHS T32 GM0008490
6 · The paper itself

Abstract

The genomic loci associated with B cell differentiation that are subject to transcriptional and epigenetic regulation in vivo are not well defined, leaving a gap in our understanding of the development of humoral immune responses. Here, using an in vivo T cell independent B cell differentiation model, we define a cellular division-dependent cis-regulatory element road map using ATAC-seq. Chromatin accessibility changes correlate with gene expression and reveal the reprogramming of transcriptional networks and the genes they regulate at specific cell divisions. A subset of genes in naive B cells display accessible promoters in the absence of transcription and are marked by H3K27me3, an EZH2 catalyzed repressive modification. Such genes encode regulators of cell division and metabolism and include the essential plasma cell transcription factor Blimp-1. Chemical inhibition of EZH2 results in enhanced plasma cell formation, increased expression of the above gene set, and premature expression of Blimp-1 ex vivo. These data provide insights into cell-division coupled epigenetic and transcriptional processes that program plasma cells.

Indexed as

AnimalsCell DifferentiationCell DivisionCell Line, TumorDNA MethylationEnhancer of Zeste Homolog 2 ProteinEpigenesis, GeneticHistonesImmunity, HumoralMice, Inbred C57BLMice, TransgenicPlasma CellsPositive Regulatory Domain I-Binding Factor 1Primary Cell CulturePromoter Regions, GeneticEnhancer of Zeste Homolog 2 ProteinEzh2 protein, mouseHistonesPositive Regulatory Domain I-Binding Factor 1Prdm1 protein, mouse

Identifiers

PMID29703886
PMCPMC5923265
OpenAlexW2799828163

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.