Evidence map›Paper›PMID 29703829›Full record

ArticleJournal of medical genetics2018

Old gene, new phenotype: splice-altering variants in

Kevin T Booth, Kimia Kahrizi, Hossein Najmabadi, Hela Azaiez, Richard Jh Smith

Open access · greenAbstract read
In one paragraph

Article in Journal of medical genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. TECTB Variants Reveal Tectorial Membrane Vulnerability in Dominant Non-Syndromic Hearing Loss.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. [The cochlear extracellular matrix gene mutations and hearing loss].Lin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery · 2025
    Review
  3. Article
  4. Review
  5. Mutational spectrum in patients with dominant non-syndromic hearing loss in Austria.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2024
    Article
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  8. ARNSHL gene identification: past, present and future.Molecular genetics and genomics : MGG · 2022
    Review
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  10. Article
  11. Review
  12. Review
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  15. Article
  16. [Identification of a novel mutation of CEACAM16 gene in a Chinese family with autosomal dominant nonsyndromic hearing loss].Lin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery · 2020
    Article
  17. International journal of molecular sciences · 2020
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Kevin T Booth *Molecular Otolaryngology Renal Research Laboratories, Department of Otolaryngology, University of Iowa, Iowa City, Iowa, USA.ORCID 0000-0003-3061-3652
Kimia Kahrizi *Genetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Islamic Republic of Iran.ORCID 0000-0002-6587-7706
Hossein NajmabadiGenetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Islamic Republic of Iran.ORCID 0000-0002-6084-7778
Hela Azaiez *Molecular Otolaryngology Renal Research Laboratories, Department of Otolaryngology, University of Iowa, Iowa City, Iowa, USA.ORCID 0000-0002-2863-6970
Richard Jh Smith *Molecular Otolaryngology Renal Research Laboratories, Department of Otolaryngology, University of Iowa, Iowa City, Iowa, USA.ORCID 0000-0003-1201-6731
University of Iowa · USUniversity of Social Welfare and Rehabilitation Sciences · IR

Funding

NONSYNDROMIC HEARING LOSS--A COLLABORATIVE STUDYR01DC002842 · NIDCD · UNIVERSITY OF IOWA · PI SMITH, RICHARD J.H. · 1996 to 2024
$12.7M
Optimizing Genetic Testing for Deafness for Clinical DiagnosticsR01DC012049 · NIDCD · UNIVERSITY OF IOWA · PI TERRY A BRAUN, Thomas L. Casavant · 2011 to 2026
$8.7M
AUTOSOMAL DOMINANT NONSYNDROMIC HEARING LOSSR01DC003544 · NIDCD · UNIVERSITY OF IOWA · PI SMITH, RICHARD J.H. · 1998 to 2017
$7.8M
Otosclerosis-A Molecular Genetic StudyR01DC005218 · NIDCD · UNIVERSITY OF IOWA · PI SMITH, RICHARD J. H. · 2002 to 2006
$1.5M
NIDCD NIH HHS R01 DC002842NIDCD NIH HHS R01 DC003544NIDCD NIH HHS R01 DC005218NIDCD NIH HHS R01 DC012049
6 · The paper itself

Abstract

backgroundHearing loss is a genetically and phenotypically heterogeneous disorder.

objectivesThe purpose of this study was to determine the genetic cause underlying the postlingual progressive hearing loss in two Iranian families.

methodsWe used OtoSCOPE, a next-generation sequencing platform targeting >150 genes causally linked to deafness, to screen two deaf probands. Data analysis was completed using a custom bioinformatics pipeline, and variants were functionally assessed using minigene splicing assays.

resultsWe identified two homozygous splice-altering variants (c.37G>T and c.662-1G>C) in the

conclusionsThese results suggest that loss-of-function mutations in

Indexed as

Alternative SplicingGenetic Association StudiesGenetic Predisposition to DiseaseGenetic VariationPhenotypeAdultAllelesCell Adhesion MoleculesComputational BiologyConsanguinityGenotypeHearing LossHumansIranMiddle AgedMutationCEACAM16 protein, humanCell Adhesion Moleculesceacam16deafnessnon-syndromic hearing losssplice-site

Identifiers

PMID29703829
PMCPMC6060001
OpenAlexW2802578702

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.