Evidence map›Paper›PMID 29703740›Full record

ArticleApplied and environmental microbiology2018

Free-Chlorine Disinfection as a Selection Pressure on Norovirus.

Andri Taruna Rachmadi, Masaaki Kitajima, Kozo Watanabe, Sakiko Yaegashi, Joeselle Serrana, Arata Nakamura, Toyoko Nakagomi, Osamu Nakagomi, Kazuhiko Katayama, Satoshi Okabe and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Andri Taruna RachmadiDivision of Environmental Engineering, Hokkaido University, Sapporo, Hokkaido, Japan.ORCID 0000-0002-3133-5917
Masaaki KitajimaDivision of Environmental Engineering, Hokkaido University, Sapporo, Hokkaido, Japan.
Kozo WatanabeDepartment of Civil and Environmental Engineering, Ehime University, Matsuyama, Ehime, Japan.
Sakiko YaegashiDepartment of Civil and Environmental Engineering, Ehime University, Matsuyama, Ehime, Japan.
Joeselle SerranaDepartment of Civil and Environmental Engineering, Ehime University, Matsuyama, Ehime, Japan.
Arata NakamuraDivision of Environmental Engineering, Hokkaido University, Sapporo, Hokkaido, Japan.
Toyoko NakagomiDepartment of Molecular Microbiology and Immunology, Nagasaki University, Nagasaki, Japan.
Osamu NakagomiDepartment of Molecular Microbiology and Immunology, Nagasaki University, Nagasaki, Japan.
Kazuhiko KatayamaLaboratory of Viral Infection I, Department of Infection Control and Immunology, Kitasato Institute for Life Sciences, Kitasato University, Tokyo, Japan.
Satoshi OkabeDivision of Environmental Engineering, Hokkaido University, Sapporo, Hokkaido, Japan.
Daisuke SanoDepartment of Civil and Environmental Engineering, Tohoku University, Sendai, Miyagi, Japan daisuke.sano.e1@tohoku.ac.jp.ORCID 0000-0001-8075-6972
Ehime University · JPHokkaido University · JPNagasaki University · JPTohoku University · JPKitasato University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human noroviruses are excreted in feces from infected individuals and included in wastewater. It is critical to remove/inactivate them in wastewater treatment processes, particularly in the disinfection step, before release to aquatic environments. However, the high mutation rates of human noroviruses raise concerns about the emergence of strains that are less susceptible to disinfectants and can survive even after wastewater treatment. This study aimed to demonstrate the strain-dependent susceptibility of norovirus to free chlorine. A population originated from the murine norovirus strain S7-PP3, a surrogate for human noroviruses in environmental testing, was exposed to free chlorine and then propagated in a host cell. This cycle of free chlorine exposure followed by propagation in cells was repeated 10 times, and populations with lower susceptibility to free chlorine were obtained from two independent trials of chlorine exposure cycles. Open reading frame 2 (ORF2) and ORF3 of the murine norovirus genome were analyzed by next-generation sequencing, and a unique nonsynonymous mutation (corresponding to a change from phenylalanine to serine) at nucleotide (nt) 7280 in ORF3, which encodes the minor capsid protein VP2, was found in chlorine-exposed populations from both trials. It was confirmed that all of the clones from the chlorine-treated population had lower susceptibility to free chlorine than those from the control population. These results indicate that exposure to free chlorine and dilution exert different driving forces to form murine norovirus (MNV) quasispecies, and that there is a selective force to form MNV quasispecies under free chlorine exposure.

Indexed as

AnimalsCapsid ProteinsChlorineDisinfectantsDisinfectionDrug Resistance, ViralGenetic DriftGenetic FitnessMiceMutationNorovirusOpen Reading FramesPolymorphism, Single NucleotideRAW 264.7 CellsSelection, GeneticVirus InactivationCapsid ProteinsChlorineDisinfectantsWastewaterfree chlorinegenetic driftmutationnorovirusselectionsusceptibility

Identifiers

PMID29703740
PMCPMC6007107
OpenAlexW2802404611

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.