Evidence map›Paper›PMID 29703252›Full record

ArticleBMC cancer2018

Investigation of the SLC22A23 gene in laryngeal squamous cell carcinoma.

Seda Ekizoglu, Didem Seven, Turgut Ulutin, Jalal Guliyev, Nur Buyru

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. DIAPH2 gene polymorphisms and laryngeal cancer risk in men.Journal of cancer research and clinical oncology · 2024
    Article
  4. Article
  5. Drug metabolism and disposition: the biological fate of chemicals · 2021
    Article
  6. Article
  7. Article
  8. DIAPH2, PTPRD and HIC1 Gene Polymorphisms and Laryngeal Cancer Risk.International journal of environmental research and public health · 2021
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Seda EkizogluCerrahpasa Medical Faculty, Department of Medical Biology, Istanbul University, Kocamustafapasa, 34098, Istanbul, Turkey.
Didem SevenCerrahpasa Medical Faculty, Department of Medical Biology, Istanbul University, Kocamustafapasa, 34098, Istanbul, Turkey.
Turgut UlutinCerrahpasa Medical Faculty, Department of Medical Biology, Istanbul University, Kocamustafapasa, 34098, Istanbul, Turkey.
Jalal GuliyevCerrahpasa Medical Faculty, Department of Otorhinolaryngology, Istanbul University, Istanbul, Turkey.
Nur BuyruCerrahpasa Medical Faculty, Department of Medical Biology, Istanbul University, Kocamustafapasa, 34098, Istanbul, Turkey. nbuyru@yahoo.com.
Istanbul University · TR

Funding

Bilimsel Araştirma Projeleri Birimi, Istanbul Üniversitesi 24305Bilimsel Araştirma Projeleri Birimi, Istanbul Üniversitesi 49005
6 · The paper itself

Abstract

backgroundLaryngeal squamous cell carcinoma (LSCC) is the second most common cancer of the head and neck. In order to identify differentially expressed genes which may have a role in LSCC carcinogenesis, we performed GeneFishing Assay. One of the differentially expressed genes was the SLC22A23 (solute carrier family 22, member 23) gene. SLC22A23 belongs to a family of organic ion transporters that are responsible for the absorption or excretion of many drugs, xenobiotics and endogenous compounds in a variety of tissues. SLC22A23 is expressed in a various tissues but no substrates or functions have been identified for it. Although the exact function is unknown, single nucleotide polymorphisms (SNPs) which are located in SLC22A23 gene were associated with inflammatory bowel disease (IBD), endometriosis-related infertility and the clearance of antipsychotic drugs. On the other hand SLC22A23 is identified as a prognostic gene to predict the recurrence of triple-negative breast cancer.

methodsTo understand the role of the SLC22A23 gene in laryngeal carcinogenesis, we investigated its mRNA expression level in laryngeal tumor tissue and adjacent non-cancerous tissue samples obtained from 83 patients by quantitative real-time PCR. To understand the association between SNPs in SLC22A23 and LSCC, selected genetic variations (rs4959235, rs6923667, rs9503518) were genotyped.

resultsWe found that SLC22A23 expression was increased in 46 of 83 tumor tissues (55.4%) and was decreased in 30 of 83 (36.1%) tumor tissues compared to normal tissues. 77.2% of patients were homozygote for genotype rs9503518-AA and they most frequently had histological grade 2 and 3 tumors. We also found that rs9503518-AA genotype is associated with increased SLC22A23 expression.

conclusionsOur results indicate that SLC22A23 may play a role in the development of laryngeal cancer.

Indexed as

Gene Expression Regulation, NeoplasticAgedAllelesCarcinoma, Squamous CellFemaleGene Expression ProfilingGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansLaryngeal NeoplasmsMaleMiddle AgedNeoplasm GradingNeoplasm StagingOrganic Anion TransportersOrganic Anion TransportersSLC22A23 protein, humanExpressionGeneFishingGenotypingLaryngeal cancerSLC22A23

Identifiers

PMID29703252
PMCPMC5921549
OpenAlexW2800135515

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.