Evidence map›Paper›PMID 29700756›Full record

ArticleJournal of biomolecular NMR2018

Complete assignment of Ala, Ile, Leu, Met and Val methyl groups of human blood group A and B glycosyltransferases using lanthanide-induced pseudocontact shifts and methyl-methyl NOESY.

Friedemann Flügge, Thomas Peters

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Article in Journal of biomolecular NMR, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. AMIGO - Guided assignment ofJournal of biomolecular NMR · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Assignment of Ala, Ile, LeuBiomolecular NMR assignments · 2022
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Friedemann FlüggeInstitute for Chemistry and Metabolomics, Center for Structural and Cell Biology in Medicine, University of Lübeck, Ratzeburger Allee 160, 23562, Lübeck, Germany.
Thomas PetersInstitute for Chemistry and Metabolomics, Center for Structural and Cell Biology in Medicine, University of Lübeck, Ratzeburger Allee 160, 23562, Lübeck, Germany. thomas.peters@uni-luebeck.de.ORCID 0000-0002-7570-8260

Funding

Deutsche Forschungsgemeinschaft DFG Pe494/11-1inext PID 1483 and PID 2254
6 · The paper itself

Abstract

Human blood group A and B glycosyltransferases (GTA, GTB) are highly homologous glycosyltransferases. A number of high-resolution crystal structures is available showing that these enzymes convert from an open conformation into a catalytically active closed conformation upon substrate binding. However, the mechanism of glycosyltransfer is still under debate, and the precise nature as well as the time scales of conformational transitions are unknown. NMR offers a variety of experiments to shine more light on these unresolved questions. Therefore, in a first step we have assigned all methyl resonance signals in MILVA labeled samples of GTA and GTB, still a challenging task for 70 kDa homodimeric proteins. Assignments were obtained from methyl-methyl NOESY experiments, and from measurements of lanthanide-induced pseudocontact shifts (PCS) using high resolution crystal structures as templates. PCSs and chemical shift perturbations, induced by substrate analogue binding, suggest that the fully closed state is not adopted in the presence of lanthanide ions.

Indexed as

Amino AcidsGalactosyltransferasesHumansLanthanoid Series ElementsN-AcetylgalactosaminyltransferasesNuclear Magnetic Resonance, BiomolecularProtein BindingAmino Acidsblood-group-substance alpha-D-galactosyltransferaseGalactosyltransferasesLanthanoid Series ElementsN-AcetylgalactosaminyltransferasesUDPgalactosamine-galactose acetylgalactosaminyltransferase4D HMQC-NOESY-HMQCHuman blood group A and B glycosyltransferasesMethyl-TROSYMILVA labelingParamagnetic relaxation enhancement

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.