Evidence map›Paper›PMID 29700338›Full record

ArticleScientific reports2018

Novel analysis of the Harderian gland transcriptome response to Newcastle disease virus in two inbred chicken lines.

Melissa S Deist, Rodrigo A Gallardo, David A Bunn, Terra R Kelly, Jack C M Dekkers, Huaijun Zhou, Susan J Lamont

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 35 citations in OpenAlex.

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  6. Fourth Report on Chicken Genes and Chromosomes 2022.Cytogenetic and genome research · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Melissa S DeistDepartment of Animal Science, Iowa State University, Ames, Iowa, USA.
Rodrigo A GallardoDepartment of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, California, USA.
David A BunnDepartment of Animal Science, University of California, Davis, California, USA.
Terra R KellyDepartment of Animal Science, University of California, Davis, California, USA.
Jack C M DekkersDepartment of Animal Science, Iowa State University, Ames, Iowa, USA.
Huaijun ZhouDepartment of Animal Science, University of California, Davis, California, USA.
Susan J LamontDepartment of Animal Science, Iowa State University, Ames, Iowa, USA. sjlamont@iastate.edu.
University of California, Davis · USIowa State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Behind each eye of the chicken resides a unique lymph tissue, the Harderian gland, for which RNA sequencing (RNA-seq) analysis is novel. We characterized the response of this tissue to Newcastle disease virus (NDV) in two inbred lines with different susceptibility to NDV across three time points. Three-week-old relatively resistant (Fayoumi) and relatively susceptible (Leghorn) birds were inoculated with a high-titered (10

Indexed as

Newcastle disease virusTranscriptomeAnimalsAnimals, Inbred StrainsChickensGene Expression ProfilingGene Regulatory NetworksHarderian GlandHost-Pathogen InteractionsNewcastle DiseaseReproducibility of Results

Identifiers

PMID29700338
PMCPMC5920083
OpenAlexW2805302945

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.