Evidence map›Paper›PMID 29698515›Full record

ArticlePloS one2018

Identification and characterization of a plastidial ω-3 fatty acid desaturase EgFAD8 from oil palm (Elaeis guineensis Jacq.) and its promoter response to light and low temperature.

Lizhi Chen, Lei Wang, Herong Wang, Ruhao Sun, Lili You, Yusheng Zheng, Yijun Yuan, Dongdong Li

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  5. Article
  6. Review
  7. Article
  8. Article
  9. Modification of sesame (Biotechnology reports (Amsterdam, Netherlands) · 2021
    Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Lizhi ChenKey Laboratory of Advanced Materials of Tropical Island Resources, Ministry of Education; Department of Bioengineering, College of Material and Chemical Engineering, Hainan University, Haikou, Hainan, China.
Lei WangKey Laboratory of Advanced Materials of Tropical Island Resources, Ministry of Education; Department of Bioengineering, College of Material and Chemical Engineering, Hainan University, Haikou, Hainan, China.
Herong WangKey Laboratory of Advanced Materials of Tropical Island Resources, Ministry of Education; Department of Bioengineering, College of Material and Chemical Engineering, Hainan University, Haikou, Hainan, China.
Ruhao SunKey Laboratory of Advanced Materials of Tropical Island Resources, Ministry of Education; Department of Bioengineering, College of Material and Chemical Engineering, Hainan University, Haikou, Hainan, China.
Lili YouInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan, China.
Yusheng ZhengKey Laboratory of Advanced Materials of Tropical Island Resources, Ministry of Education; Department of Bioengineering, College of Material and Chemical Engineering, Hainan University, Haikou, Hainan, China.
Yijun YuanKey Laboratory of Advanced Materials of Tropical Island Resources, Ministry of Education; Department of Bioengineering, College of Material and Chemical Engineering, Hainan University, Haikou, Hainan, China.
Dongdong LiKey Laboratory of Advanced Materials of Tropical Island Resources, Ministry of Education; Department of Bioengineering, College of Material and Chemical Engineering, Hainan University, Haikou, Hainan, China.ORCID 0000-0003-4006-3551
Hainan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In higher plants, ω-3 fatty acid desaturases are the key enzymes in the biosynthesis of alpha-linolenic acid (18:3), which plays key roles in plant metabolism as a structural component of both storage and membrane lipids. Here, the first ω-3 fatty acid desaturase gene was identified and characterized from oil palm. The bioinformatic analysis indicated it encodes a temperature-sensitive chloroplast ω-3 fatty acid desaturase, designated as EgFAD8. The expression analysis revealed that EgFAD8 is highly expressed in the oil palm leaves, when compared with the expression in the mesocarp. The heterologous expression of EgFAD8 in yeast resulted in the production of a novel fatty acid 18:3 (about 0.27%), when fed with 18:2 in the induction culture. Furthermore, to detect whether EgFAD8 could be induced by the environment stress, we detected the expression efficiency of the EgFAD8 promoter in transgenic Arabidopsis treated with low temperature and darkness, respectively. The results indicated that the promoter of EgFAD8 gene could be significantly induced by low temperature and slightly induced by darkness. These results reveal the function of EgFAD8 and the feature of its promoter from oil palm fruits, which will be useful for understanding the fuction and regulation of plastidial ω-3 fatty acid desaturases in higher plants.

Indexed as

ArabidopsisArecaceaeChromatography, GasCloning, MolecularFatty Acid DesaturasesFatty AcidsLightPhylogenyPlant LeavesPlants, Genetically ModifiedPlastidsPromoter Regions, GeneticSaccharomyces cerevisiaeTemperatureFatty Acid DesaturasesFatty Acidsomega-3 fatty acid desaturase

Identifiers

PMID29698515
PMCPMC5919639
OpenAlexW2802758493

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.