Evidence map›Paper›PMID 29697309›Full record

ArticleVirulence2018

Comprehensive identification of Vibrio vulnificus genes required for growth in human serum.

M Carda-Diéguez, F X Silva-Hernández, T P Hubbard, M C Chao, M K Waldor, C Amaro

Open access · goldAbstract read
In one paragraph

Article in Virulence, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Genome analysis of clinical genotypeThe veterinary quarterly · 2023
    Article
  4. Vibrio vulnificus, an Underestimated Zoonotic Pathogen.Advances in experimental medicine and biology · 2023
    Review
  5. Article
  6. Article
  7. TrkA serves as a virulence modulator inFrontiers in cellular and infection microbiology · 2022
    Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

M Carda-Diégueza Department of Microbiology and Ecology , University of Valencia. Dr. Moliner 50 , Burjassot , Spain.
F X Silva-Hernándeza Department of Microbiology and Ecology , University of Valencia. Dr. Moliner 50 , Burjassot , Spain.ORCID 0000-0002-4294-9295
T P Hubbardc Division of Infectious Disease , Brigham and Women's Hospital , Boston , Massachusetts , United States of America.
M C Chaoc Division of Infectious Disease , Brigham and Women's Hospital , Boston , Massachusetts , United States of America.ORCID 0000-0002-6046-585X
M K Waldorc Division of Infectious Disease , Brigham and Women's Hospital , Boston , Massachusetts , United States of America.ORCID 0000-0003-1843-7000
C Amaroa Department of Microbiology and Ecology , University of Valencia. Dr. Moliner 50 , Burjassot , Spain.ORCID 0000-0003-1323-6330
Brigham and Women's Hospital · USUniversitat de València · ES

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAYNE I LENCER · 1986 to 2026
$32.4M
Vibrio cholerae intestinal colonization and vaccine developmentR01AI042347 · NIAID · TUFTS UNIVERSITY BOSTON · PI WALDOR, MATTHEW K · 1998 to 2025
$7.3M
Genetic Analysis of Vibrio parahaemolyticus PathogenicityF31AI120665 · NIAID · HARVARD MEDICAL SCHOOL · PI HUBBARD, TROY PATRICK · 2015 to 2017
$96k
NIAID NIH HHS F31 AI120665NIAID NIH HHS R01 AI042347NIDDK NIH HHS P30 DK034854
6 · The paper itself

Abstract

Vibrio vulnificus can be a highly invasive pathogen capable of spreading from an infection site to the bloodstream, causing sepsis and death. To survive and proliferate in blood, the pathogen requires mechanisms to overcome the innate immune defenses and metabolic limitations of this host niche. We created a high-density transposon mutant library in YJ016, a strain representative of the most virulent V. vulnificus lineage (or phylogroup) and used transposon insertion sequencing (TIS) screens to identify loci that enable the pathogen to survive and proliferate in human serum. Initially, genes underrepresented for insertions were used to estimate the V. vulnificus essential gene set; comparisons of these genes with similar TIS-based classification of underrepresented genes in other vibrios enabled the compilation of a common Vibrio essential gene set. Analysis of the relative abundance of insertion mutants in the library after exposure to serum suggested that genes involved in capsule biogenesis are critical for YJ016 complement resistance. Notably, homologues of two genes required for YJ016 serum-resistance and capsule biogenesis were not previously linked to capsule biogenesis and are largely absent from other V. vulnificus strains. The relative abundance of mutants after exposure to heat inactivated serum was compared with the findings from the serum screen. These comparisons suggest that in both conditions the pathogen relies on its Na

Indexed as

AnimalsBacterial ProteinsBloodDNA Transposable ElementsFemaleHumansMiceMice, Inbred BALB CVibrio InfectionsVibrio vulnificusVirulenceBacterial ProteinsDNA Transposable Elementscapsuleresistance to human complementsepticaemiatransposon insertion sequencing (TIS)Vibrio vulnificus

Identifiers

PMID29697309
PMCPMC6037467
OpenAlexW2809700524

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.