ArticleScientific reports2018
The Phytophthora cactorum genome provides insights into the adaptation to host defense compounds and fungicides.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 30 papers.
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30 citing papers in PubMed.
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- Novel application of ribonucleoprotein-mediated CRISPR-Cas9 gene editing in plant pathogenic oomycete species.Microbiology spectrum · 2025Article
- A qPCR assay for the detection of Phytophthora abietivora, an emerging pathogen on fir species cultivated as Christmas trees.PloS one · 2025Article
- DNA methylation analysis reveals local changes in resistant and susceptible soybean lines in response to Phytophthora sansomeana.G3 (Bethesda, Md.) · 2024Article
- Deciphering fungicide resistance in Phytophthora: mechanisms, prevalence, and sustainable management approaches.World journal of microbiology & biotechnology · 2024Review
- Transcriptome analysis ofFrontiers in plant science · 2024Article
- Functional genomics identifies a small secreted protein that plays a role during the biotrophic to necrotrophic shift in the root rot pathogenFrontiers in plant science · 2024Article
- Reference Genome Resource for the Citrus PathogenJournal of genomics · 2024Article
- Heterogeneity in establishment of polyethylene glycol-mediated plasmid transformations for five forest pathogenic Phytophthora species.PloS one · 2024Article
- The devastating oomycete phytopathogen Phytophthora cactorum: Insights into its biology and molecular features.Molecular plant pathology · 2023Review
- Genome analysis ofFrontiers in microbiology · 2023Article
- Foliar Pathogen Infection Manipulates Soil Health through Root Exudate-Modified Rhizosphere Microbiome.Microbiology spectrum · 2022Article
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- Defense mechanisms promoting tolerance to aggressiveFrontiers in plant science · 2022Article
- Chromosome-level assembly of theFrontiers in microbiology · 2022Article
- Comparative Genome Analysis Across 128Frontiers in microbiology · 2022Article
- Enrichment ofMicrobiology spectrum · 2021Article
- Autotoxin RgMicrobiology spectrum · 2021Article
- Genome of the destructive oomycete Phytophthora cinnamomi provides insights into its pathogenicity and adaptive potential.BMC genomics · 2021Article
Corrections and comments
- Erratum issued
Authors and funding
13 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Phytophthora cactorum is a homothallic oomycete pathogen, which has a wide host range and high capability to adapt to host defense compounds and fungicides. Here we report the 121.5 Mb genome assembly of the P. cactorum using the third-generation single-molecule real-time (SMRT) sequencing technology. It is the second largest genome sequenced so far in the Phytophthora genera, which contains 27,981 protein-coding genes. Comparison with other Phytophthora genomes showed that P. cactorum had a closer relationship with P. parasitica, P. infestans and P. capsici. P. cactorum has similar gene families in the secondary metabolism and pathogenicity-related effector proteins compared with other oomycete species, but specific gene families associated with detoxification enzymes and carbohydrate-active enzymes (CAZymes) underwent expansion in P. cactorum. P. cactorum had a higher utilization and detoxification ability against ginsenosides-a group of defense compounds from Panax notoginseng-compared with the narrow host pathogen P. sojae. The elevated expression levels of detoxification enzymes and hydrolase activity-associated genes after exposure to ginsenosides further supported that the high detoxification and utilization ability of P. cactorum play a crucial role in the rapid adaptability of the pathogen to host plant defense compounds and fungicides.
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