Evidence map›Paper›PMID 29695509›Full record

ArticleThe Journal of biological chemistry2018

Myc phosphorylation in its basic helix-loop-helix region destabilizes transient α-helical structures, disrupting Max and DNA binding.

Pavel Macek, Matthew J Cliff, Kevin J Embrey, Geoffrey A Holdgate, J Willem M Nissink, Stanislava Panova, Jonathan P Waltho, Rick A Davies

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Regulation of Cancer Metastasis by PAK2.International journal of molecular sciences · 2024
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
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  15. Article
  16. Dynamic Control of Signaling by Phosphorylation of PDZ Binding Motifs.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Pavel MacekFrom AstraZeneca, IMED Discovery Sciences, Alderley Park SK10 4TG, United Kingdom, macek@nmr-bio.com.ORCID 0000-0003-3774-7717
Matthew J Cliffthe Manchester Institute of Biotechnology and School of Chemistry, University of Manchester, Manchester M1 7DN, United Kingdom.
Kevin J EmbreyAstraZeneca, IMED Discovery Sciences, Cambridge CB4 0WG, United Kingdom.
Geoffrey A HoldgateAstraZeneca, IMED Discovery Sciences, Cambridge CB4 0WG, United Kingdom.
J Willem M NissinkAstraZeneca, IMED Oncology, Cambridge CB4 0WG, United Kingdom, and.ORCID 0000-0003-2572-9140
Stanislava Panovathe Manchester Institute of Biotechnology and School of Chemistry, University of Manchester, Manchester M1 7DN, United Kingdom.ORCID 0000-0002-9331-5962
Jonathan P Walthothe Manchester Institute of Biotechnology and School of Chemistry, University of Manchester, Manchester M1 7DN, United Kingdom.
Rick A DaviesFrom AstraZeneca, IMED Discovery Sciences, Alderley Park SK10 4TG, United Kingdom, rick.davies@astrazeneca.com.
AstraZeneca (United Kingdom) · GBUniversity of Manchester · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Myelocytomatosis proto-oncogene transcription factor (Myc) is an intrinsically disordered protein with critical roles in cellular homeostasis and neoplastic transformation. It is tightly regulated in the cell, with Myc phosphorylation playing a major role. In addition to the well-described tandem phosphorylation of Thr-52 and Ser-62 in the Myc transactivation domain linked to its degradation, P21 (RAC1)-activated kinase 2 (PAK2)-mediated phosphorylation of serine and threonine residues in the C-terminal basic helix-loop-helix leucine zipper (bHLH-LZ) region regulates Myc transcriptional activity. Here we report that PAK2 preferentially phosphorylates Myc twice, at Thr-358 and Ser-373, with only a minor fraction being modified at the previously identified Thr-400 site. For transcriptional activity, Myc binds E-box DNA elements, requiring its heterodimerization with Myc-associated factor X (Max) via the bHLH-LZ regions. Using isothermal calorimetry (ITC), we found that Myc phosphorylation destabilizes this ternary protein-DNA complex by decreasing Myc's affinity for Max by 2 orders of magnitude, suggesting a major effect of phosphorylation on this complex. Phosphomimetic substitutions revealed that Ser-373 dominates the effect on Myc-Max heterodimerization. Moreover, a T400D substitution disrupted Myc's affinity for Max. ITC, NMR, and CD analyses of several Myc variants suggested that the effect of phosphorylation on the Myc-Max interaction is caused by secondary structure disruption during heterodimerization rather than by a change in the structurally disordered state of Myc or by phosphorylation-induced electrostatic repulsion in the heterodimer. Our findings provide critical insights into the effects of PAK2-catalyzed phosphorylation of Myc on its interactions with Max and DNA.

Indexed as

Amino Acid SequenceBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsDNAHumansModels, MolecularPhosphorylationProtein BindingProtein ConformationProtein Conformation, alpha-HelicalProtein Interaction MapsProtein StabilityProto-Oncogene MasProto-Oncogene Proteins c-mycBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsDNAMAS1 protein, humanMAX protein, humanMYC protein, humanProto-Oncogene MasProto-Oncogene Proteins c-mycbiophysicsintrinsically disordered proteinMyc (c-Myc)protein dynamicprotein phosphorylationprotein–protein interaction

Identifiers

PMID29695509
PMCPMC6005445
OpenAlexW2800685888

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.