Evidence map›Paper›PMID 29695503›Full record

ArticleThe Journal of biological chemistry2018

Structure-guided design and functional characterization of an artificial red light-regulated guanylate/adenylate cyclase for optogenetic applications.

Stefan Etzl, Robert Lindner, Matthew D Nelson, Andreas Winkler

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
10.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
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  5. Cardiac optogenetics: shining light on signaling pathways.Pflugers Archiv : European journal of physiology · 2023
    Review
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  8. The structural effect between the output module and chromophore-binding domain is a two-way street via the hairpin extension.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Stefan EtzlFrom the Institute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.
Robert Lindnerthe Max Planck Institute for Medical Research, Jahnstrasse 29, Heidelberg 69120, Germany, and.
Matthew D Nelsonthe Department of Biology, Saint Joseph's University, Philadelphia, Pennsylvania 19131.ORCID 0000-0002-2085-8974
Andreas WinklerFrom the Institute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria, Andreas.Winkler@TUGraz.at.ORCID 0000-0001-6221-9671
Graz University of Technology · ATMax Planck Institute for Medical Research · DESaint Joseph's University · US

Funding

Dissecting the cAMP-mediated circuitry of stress-induced sleep in Caenorhabditis elegansR15GM122058 · NIGMS · SAINT JOSEPH'S UNIVERSITY · PI NELSON, MATTHEW D · 2016 to 2016
$324k
Austrian Science Fund FWF P 27124NIGMS NIH HHS R15 GM122058
6 · The paper itself

Abstract

Genetically targeting biological systems to control cellular processes with light is the concept of optogenetics. Despite impressive developments in this field, underlying molecular mechanisms of signal transduction of the employed photoreceptor modules are frequently not sufficiently understood to rationally design new optogenetic tools. Here, we investigate the requirements for functional coupling of red light-sensing phytochromes with non-natural enzymatic effectors by creating a series of constructs featuring the

Indexed as

Adenylyl CyclasesAmino Acid SequenceAnimalsCaenorhabditis elegansCrystallography, X-RayDeinococcusGuanylate CyclaseLightMolecular Dynamics SimulationOptogeneticsPhytochromeProtein ConformationRecombinant Fusion ProteinsSynechocystisAdenylyl CyclasesGuanylate CyclasePhytochromeRecombinant Fusion Proteinsadenylate cyclase (adenylyl cyclase)adenylyl cyclaseallosteric regulationbacteriophytochromeguanylate cyclase (guanylyl cyclase)hydrogen-deuterium exchangelight regulationoptogeneticsphotoreceptorphotosensor

Identifiers

PMID29695503
PMCPMC5995499
OpenAlexW2800236904

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.