Evidence map›Paper›PMID 29695303›Full record

ArticleGenome biology2018

Histone H4 acetylation regulates behavioral inter-individual variability in zebrafish.

Angel-Carlos Román, Julián Vicente-Page, Alfonso Pérez-Escudero, Jose M Carvajal-González, Pedro M Fernández-Salguero, Gonzalo G de Polavieja

Abstract read
In one paragraph

Article in Genome biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Ecotoxicological Effects of Potassium Dichromate on the Tadpole ShrimpAnimals : an open access journal from MDPI · 2024
    Article
  3. Article
  4. Article
  5. Brain evolution in social insects: advocating for the comparative approach.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2019
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Angel-Carlos RománChampalimaud Neuroscience Programme, Champalimaud Centre for the Unknown, Avenida Brasília s/n, 1400-038, Lisbon, Portugal. angel.roman@neuro.fchampalimaud.org.ORCID 0000-0002-5868-6768
Julián Vicente-PageChampalimaud Neuroscience Programme, Champalimaud Centre for the Unknown, Avenida Brasília s/n, 1400-038, Lisbon, Portugal.
Alfonso Pérez-EscuderoInstituto Cajal, Consejo Superior de Investigaciones Científicas, Av. Doctor Arce, 37, 28002, Madrid, Spain.
Jose M Carvajal-GonzálezDepartamento de Bioquímica y Biología Molecular y Genética, Universidad de Extremadura, Av. de Elvas s/n, 06071, Badajoz, Spain.
Pedro M Fernández-SalgueroDepartamento de Bioquímica y Biología Molecular y Genética, Universidad de Extremadura, Av. de Elvas s/n, 06071, Badajoz, Spain.
Gonzalo G de PolaviejaChampalimaud Neuroscience Programme, Champalimaud Centre for the Unknown, Avenida Brasília s/n, 1400-038, Lisbon, Portugal. gonzalo.polavieja@neuro.fchampalimaud.org.ORCID 0000-0001-5359-3426

Funding

Fundação para a Ciência e a Tecnologia PTDC/NEU-751 SCC/0948/2014Ministerio de Economía y Competitividad BFU2011-22678Ministerio de Economía y Competitividad BFU2012-33448Ministerio de Economía y Competitividad BFU2014-54699-P
6 · The paper itself

Abstract

backgroundAnimals can show very different behaviors even in isogenic populations, but the underlying mechanisms to generate this variability remain elusive. We use the zebrafish (Danio rerio) as a model to test the influence of histone modifications on behavior.

resultsWe find that laboratory and isogenic zebrafish larvae show consistent individual behaviors when swimming freely in identical wells or in reaction to stimuli. This behavioral inter-individual variability is reduced when we impair the histone deacetylation pathway. Individuals with high levels of histone H4 acetylation, and specifically H4K12, behave similarly to the average of the population, but those with low levels deviate from it. More precisely, we find a set of genomic regions whose histone H4 acetylation is reduced with the distance between the individual and the average population behavior. We find evidence that this modulation depends on a complex of Yin-yang 1 (YY1) and histone deacetylase 1 (HDAC1) that binds to and deacetylates these regions. These changes are not only maintained at the transcriptional level but also amplified, as most target regions are located near genes encoding transcription factors.

conclusionsWe suggest that stochasticity in the histone deacetylation pathway participates in the generation of genetic-independent behavioral inter-individual variability.

Indexed as

Biological Variation, PopulationHistone CodeAcetylationAnimalsGene ExpressionHistone Deacetylase 1HistonesLarvaSwimmingYY1 Transcription FactorZebrafishZebrafish ProteinsHDAC1 protein, zebrafishHistone Deacetylase 1HistonesYY1 Transcription FactorZebrafish ProteinsBehaviorEpigeneticsHDACInter-individual variabilityYY1Zebrafish

Identifiers

PMID29695303
PMCPMC5922312

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.