Evidence map›Paper›PMID 29692793›Full record

ArticleFrontiers in plant science2018

Beyond Histones: New Substrate Proteins of Lysine Deacetylases in Arabidopsis Nuclei.

Magdalena Füßl, Ines Lassowskat, Guillaume Née, Minna M Koskela, Annika Brünje, Priyadarshini Tilak, Jonas Giese, Dario Leister, Paula Mulo, Dirk Schwarzer and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Magdalena FüßlPlant Physiology, Institute of Plant Biology and Biotechnology, University of Münster, Münster, Germany.
Ines LassowskatPlant Physiology, Institute of Plant Biology and Biotechnology, University of Münster, Münster, Germany.
Guillaume NéePlant Physiology, Institute of Plant Biology and Biotechnology, University of Münster, Münster, Germany.
Minna M KoskelaMolecular Plant Biology, Department of Biochemistry, University of Turku, Turku, Finland.
Annika BrünjePlant Physiology, Institute of Plant Biology and Biotechnology, University of Münster, Münster, Germany.
Priyadarshini TilakPlant Physiology, Institute of Plant Biology and Biotechnology, University of Münster, Münster, Germany.
Jonas GiesePlant Physiology, Institute of Plant Biology and Biotechnology, University of Münster, Münster, Germany.
Dario LeisterPlant Molecular Biology, Department Biology I, Ludwig-Maximilians-University Munich, Munich, Germany.
Paula MuloMolecular Plant Biology, Department of Biochemistry, University of Turku, Turku, Finland.
Dirk SchwarzerInterfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany.
Iris FinkemeierPlant Physiology, Institute of Plant Biology and Biotechnology, University of Münster, Münster, Germany.
University of Münster · DEUniversity of Turku · FILudwig-Maximilians-Universität München · DEUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The reversible acetylation of lysine residues is catalyzed by the antagonistic action of lysine acetyltransferases and deacetylases, which can be considered as master regulators of their substrate proteins. Lysine deacetylases, historically referred to as histone deacetylases, have profound functions in regulating stress defenses and development in plants. Lysine acetylation of the N-terminal histone tails promotes gene transcription and decondensation of chromatin, rendering the DNA more accessible to the transcription machinery. In plants, the classical lysine deacetylases from the RPD3/HDA1-family have thus far mainly been studied in the context of their deacetylating activities on histones, and their versatility in molecular activities is still largely unexplored. Here we discuss the potential impact of lysine acetylation on the recently identified nuclear substrate proteins of lysine deacetylases from the Arabidopsis RPD3/HDA1-family. Among the deacetylase substrate proteins, many interesting candidates involved in nuclear protein import, transcriptional regulation, and chromatin remodeling have been identified. These candidate proteins represent key starting points for unraveling new molecular functions of the Arabidopsis lysine deacetylases. Site-directed engineering of lysine acetylation sites on these target proteins might even represent a new approach for optimizing plant growth under climate change conditions.

Indexed as

acetyltransferaseArabidopsishistone deacetylasehistoneslysine acetylationtranscription factors

Identifiers

PMID29692793
PMCPMC5902713
OpenAlexW2884419929

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.