Evidence map›Paper›PMID 29692621›Full record

ReviewPharmacogenomics and personalized medicine2018

H3Africa: current perspectives.

Nicola Mulder, Alash'le Abimiku, Sally N Adebamowo, Jantina de Vries, Alice Matimba, Paul Olowoyo, Michele Ramsay, Michelle Skelton, Dan J Stein

Abstract readReview
In one paragraph

Review in Pharmacogenomics and personalized medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 154 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
154citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

154 citing papers in PubMed, 4 syntheses or guidelines pooled it.

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94 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Nicola MulderComputational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Alash'le AbimikuInternational Research Center of Excellence, Institute of Human Virology, Abuja, Nigeria.
Sally N AdebamowoDepartment of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, MD, USA.
Jantina de VriesDepartment of Medicine, University of Cape Town, Cape Town, South Africa.
Alice MatimbaAdvanced Courses and Scientific Conferences, Wellcome Genome Campus, Hinxton, UK.
Paul OlowoyoFederal Teaching Hospital, College of Medicine and Health Sciences, Afe Babalola University, Ado-Ekiti, Nigeria.
Michele RamsaySydney Brenner Institute for Molecular Bioscience, Division of Human Genetics, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg.
Michelle SkeltonComputational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Dan J SteinDepartment of Psychiatry and Mental Health, University of Cape Town.

Funding

H3ABioNet: informatics solutions for H3AfricaU24HG006941 · NHGRI · UNIVERSITY OF CAPE TOWN · PI MULDER, NICOLA · 2017 to 2021
$12.9M
Shared Core: Biobanking, Bioinformatics and Data ManagementU54HG006938 · NHGRI · WITS HEALTH CONSORTIUM (PTY), LTD · PI RAMSAY, MICHELE MICHELE · 2012 to 2022
$12.2M
IHVN H3 Africa Biorepository InitiativeUH3HG007008 · NHGRI · INSTITUTE OF HUMAN VIROLOGY · PI ABIMIKU, ALASH'LE G. · 2015 to 2018
$2.9M
Institute of Human Virology H3Africa Biorepository (I-HAB) ADMIN SUPPLEMENTU24HG007008 · NHGRI · INSTITUTE OF HUMAN VIROLOGY · PI ABIMIKU, ALASH'LE G. · 2019 to 2022
$2.3M
GENOMICS, INHERITANCE, ETHICS, LAW AND SOCIETY (GILES) - Initiative for genomics, ethical, legal and societal issues in bioresources for human genomics in Zimbabwe.U01HG008224 · NHGRI · COLLEGE OF HEALTH SCIS UNIV OF ZIMBABWE · PI GWANZURA, LOVEMORE, KANGWENDE, RUGARE ABIGAIL · 2015 to 2017
$250k
NHGRI NIH HHS U01 HG008224NHGRI NIH HHS U24 HG006941NHGRI NIH HHS U24 HG007008NHGRI NIH HHS U54 HG006938NHGRI NIH HHS UH3 HG007008
6 · The paper itself

Abstract

Precision medicine is being enabled in high-income countries by the growing availability of health data, increasing knowledge of the genetic determinants of disease and variation in response to treatment (pharmacogenomics), and the decreasing costs of data generation, which promote routine application of genomic technologies in the health sector. However, there is uncertainty about the feasibility of applying precision medicine approaches in low- and middle-income countries, due to the lack of population-specific knowledge, skills, and resources. The Human Heredity and Health in Africa (H3Africa) initiative was established to drive new research into the genetic and environmental basis for human diseases of relevance to Africans as well as to build capacity for genomic research on the continent. Precision medicine requires this capacity, in addition to reference data on local populations, and skills to analyze and interpret genomic data from the bedside. The H3Africa consortium is collectively processing samples and data for over 70,000 participants across the continent, accompanied in most cases by rich clinical information on a variety of non-communicable and infectious diseases. These projects are increasingly providing novel insights into the genetic basis of diseases in indigenous populations, insights that have the potential to drive the development of new diagnostics and treatments. The consortium has also invested significant resources into establishing high-quality biorepositories in Africa, a bioinformatic network, and a strong training program that has developed skills in genomic data analysis and interpretation among bioinformaticians, wet-lab researchers, and health-care professionals. Here, we describe the current perspectives of the H3Africa consortium and how it can contribute to making precision medicine in Africa a reality.

Indexed as

diseasegenomic medicineH3Africapopulation geneticsprecision medicinetraining

Identifiers

PMID29692621
PMCPMC5903476

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.