Evidence map›Paper›PMID 29692303›Full record

ArticleThe American journal of tropical medicine and hygiene2018

Bunyavirus Taxonomy: Limitations and Misconceptions Associated with the Current ICTV Criteria Used for Species Demarcation.

Bradley J Blitvich, Barry J Beaty, Carol D Blair, Aaron C Brault, Gerhard Dobler, Michael A Drebot, Andrew D Haddow, Laura D Kramer, Angelle Desiree LaBeaud, Thomas P Monath and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of tropical medicine and hygiene, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. ZoonoticViruses · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. A Look intoViruses · 2021
    Review
  10. Article
  11. Identification of Bunyamwera and Possible OtherThe American journal of tropical medicine and hygiene · 2020
    Article
  12. Phylogenetic Analysis of LedniceMicroorganisms · 2019
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 11 institutions in 3 countries.

Bradley J BlitvichDepartment of Veterinary Microbiology and Preventive Medicine, College of Veterinary Medicine, Iowa State University, Ames, Iowa.
Barry J BeatyDepartment of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado.
Carol D BlairDepartment of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado.
Aaron C BraultDivision of Vector-Borne Diseases, Centers for Disease Control and Prevention, Fort Collins, Colorado.
Gerhard DoblerBundeswehr Institute of Microbiology, Munich, Germany.
Michael A DrebotNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Canada.
Andrew D HaddowVirology Division, United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Maryland.
Laura D KramerArbovirus Laboratory, Wadsworth Center, New York State Department of Health and School of Public Health, State University of New York, Albany, New York.
Angelle Desiree LaBeaudDivision of Infectious Diseases, Department of Pediatrics, Stanford University School of Medicine, Stanford, California.
Thomas P MonathCrozet BioPharma LLC, Devens, Massachusetts.
Eric C MosselDivision of Vector-Borne Diseases, Centers for Disease Control and Prevention, Fort Collins, Colorado.
Kenneth PlanteDepartment of Microbiology and Immunology, University of Texas Medical Branch, Galveston, Texas.
Ann M PowersDivision of Vector-Borne Diseases, Centers for Disease Control and Prevention, Fort Collins, Colorado.
Robert B TeshCenter for Biodefense and Emerging Infectious Diseases, University of Texas Medical Branch, Galveston, Texas.
Michael J TurellVectorID LLC, Frederick, Maryland.
Nikos VasilakisInstitute for Human Infections and Immunity, University of Texas Medical Branch, Galveston, Texas.
Scott C WeaverCenter for Tropical Diseases, University of Texas Medical Branch, Galveston, Texas.
The University of Texas Medical Branch at Galveston · USCenters for Disease Control and Prevention · USColorado State University · USCrozet BioPharma (United States) · USIowa State University · USPublic Health Agency of Canada · CAStanford University · USUnited States Army Medical Research Institute of Infectious Diseases · USUniversität der Bundeswehr München · DEVector (United States) · USWadsworth Center · US

Funding

Phenotypic characterization of T’Ho virus and the development of tools for its serologic diagnosisR03AI167042 · NIAID · IOWA STATE UNIVERSITY · PI BLITVICH, BRADLEY J · 2022 to 2023
$153k
NIAID NIH HHS R03 AI167042
6 · The paper itself

Abstract

The International Committee on Taxonomy of Viruses (ICTV) has implemented numerous changes to the taxonomic classification of bunyaviruses over the years. Whereas most changes have been justified and necessary because of the need to accommodate newly discovered and unclassified viruses, other changes are a cause of concern, especially the decision to demote scores of formerly recognized species to essentially strains of newly designated species. This practice was first described in the seventh taxonomy report of the ICTV and has continued in all subsequent reports. In some instances, viruses that share less than 75% nucleotide sequence identity across their genomes, produce vastly different clinical presentations, possess distinct vector and host associations, have different biosafety recommendations, and occur in nonoverlapping geographic regions are classified as strains of the same species. Complicating the matter is the fact that virus strains have been completely eliminated from ICTV reports; thus, critically important information on virus identities and their associated biological and epidemiological features cannot be readily related to the ICTV classification. Here, we summarize the current status of bunyavirus taxonomy and discuss the adverse consequences associated with the reclassification and resulting omission of numerous viruses of public health importance from ICTV reports. As members of the American Committee on Arthropod-borne Viruses, we encourage the ICTV Bunyavirus Study Group to reconsider their stance on bunyavirus taxonomy, to revise the criteria currently used for species demarcation, and to list additional strains of public and veterinary importance.

Indexed as

Genome, ViralPhylogenyBunyaviridaeBunyaviridae InfectionsGuidelines as TopicHumansInternational AgenciesMosquito VectorsSpecies SpecificityTerminology as Topic

Identifiers

PMID29692303
PMCPMC6085805
OpenAlexW2801440743

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.