Evidence map›Paper›PMID 29691986›Full record

Observational studyJournal of cellular and molecular medicine2018

Association of ATM and BMI-1 genetic variation with breast cancer risk in Han Chinese.

Li-Ling Yue, Fu-Chao Wang, Ming-Long Zhang, Dan Liu, Ping Chen, Qing-Bu Mei, Peng-Hui Li, Hong-Ming Pan, Li-Hong Zheng

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Journal of cellular and molecular medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 2 pooled it
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 2 syntheses or guidelines pooled it, 6 citations in OpenAlex.

  1. Polymorphism rs1801516 (G > A) in theThe Journal of international medical research · 2020
    Pooled it
  2. Pooled it
  3. Exploring the Role ofHealth science reports · 2026
    Article
  4. Article
  5. Article
  6. Vitamin D Receptor Is a Sepsis-Susceptibility Gene in Chinese Children.Medical science monitor : international medical journal of experimental and clinical research · 2021
    Article
  7. Article
  8. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Li-Ling YueDepartment of Biogenetics, Qiqihar Medical University, Qiqihar, Heilongjiang, China.
Fu-Chao WangClinical Laboratory, Daqing Oilfield General Hospital, Daqing, Heilongjiang, China.
Ming-Long ZhangDepartment of Biogenetics, Qiqihar Medical University, Qiqihar, Heilongjiang, China.
Dan LiuDepartment of Biogenetics, Qiqihar Medical University, Qiqihar, Heilongjiang, China.
Ping ChenDepartment of Biogenetics, Qiqihar Medical University, Qiqihar, Heilongjiang, China.
Qing-Bu MeiDepartment of Biogenetics, Qiqihar Medical University, Qiqihar, Heilongjiang, China.
Peng-Hui LiDepartment of Biogenetics, Qiqihar Medical University, Qiqihar, Heilongjiang, China.
Hong-Ming PanDepartment of Biochemistry, Qiqihar Medical University, Qiqihar, Heilongjiang, China.
Li-Hong ZhengDepartment of Biogenetics, Qiqihar Medical University, Qiqihar, Heilongjiang, China.ORCID 0000-0001-7711-8152
Qiqihar Medical University · CNDaqing Oilfield General Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We tested the hypothesis that genetic variation in ATM and BMI-1 genes can alter the risk of breast cancer through genotyping 6 variants among 524 breast cancer cases and 518 cancer-free controls of Han nationality. This was an observational, hospital-based, case-control association study. Analyses of single variant, linkage, haplotype, interaction and nomogram were performed. Risk was expressed as odds ratio (OR) and 95% confidence interval (CI). All studied variants were in the Hardy-Weinberg equilibrium and were not linked. The mutant allele frequencies of rs1890637, rs3092856 and rs1801516 in ATM gene were significantly higher in cases than in controls (P = .005, <.001 and .001, respectively). Two variants, rs1042059 and rs201024480, in BMI-1 gene were low penetrant, with no detectable significance. After adjustment, rs189037 and rs1801516 were significantly associated with breast cancer under the additive model (OR: 1.37 and 1.52, 95% CI: 1.10-1.71 and 1.14-2.04, P: .005 and .005, respectively). In haplotype analysis, haplotypes A-C-G-G (in order of rs189037, rs3092856, rs1801516 and rs373759) and A-C-A-A in ATM gene were significantly associated with 1.98-fold and 6.04-fold increased risk of breast cancer (95% CI: 1.36-2.90 and 1.65-22.08, respectively). Nomogram analysis estimated that the cumulative proportion of 3 significant variants in ATM gene was about 12.5%. Our findings collectively indicated that ATM gene was a candidate gene in susceptibility to breast cancer in Han Chinese.

Indexed as

Polymorphism, Single NucleotideAdolescentAsian PeopleAtaxia Telangiectasia Mutated ProteinsBreast NeoplasmsCase-Control StudiesFemaleGene FrequencyGenetic LinkageGenetic Predisposition to DiseaseHaplotypesHumansMenarcheMiddle AgedNomogramsPolycomb Repressive Complex 1Ataxia Telangiectasia Mutated ProteinsATM protein, humanBMI1 protein, humanPolycomb Repressive Complex 1associationATM geneBMI-1 genebreast cancercase-controlrisk

Identifiers

PMID29691986
PMCPMC6010860
OpenAlexW2802853796

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.