Evidence map›Paper›PMID 29691409›Full record

ArticleNature communications2018

A biochemical framework for anaerobic oxidation of methane driven by Fe(III)-dependent respiration.

Zhen Yan, Prachi Joshi, Christopher A Gorski, James G Ferry

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Review
  2. Article
  3. The extreme halophilic archaeonJournal of bacteriology · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Reply to Chadwick et al.: Data, not definitions, drive conclusions.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. A hybrid photocatalytic system enables direct glucose utilization for methanogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Respiration-driven methanotrophic growth of diverse marine methanogens.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. The root zone of graminoids: A niche for HFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Zhen YanDepartment of Biochemistry and Molecular Biology, Penn State, University Park, PA, 16801, USA.
Prachi JoshiDepartment of Civil and Environmental Engineering, Penn State, University Park, PA, 16801, USA.ORCID http://orcid.org/0000-0001-5954-0309
Christopher A GorskiDepartment of Civil and Environmental Engineering, Penn State, University Park, PA, 16801, USA.
James G FerryDepartment of Biochemistry and Molecular Biology, Penn State, University Park, PA, 16801, USA. jgf3@psu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Consumption of methane by aerobic and anaerobic microbes governs the atmospheric level of this powerful greenhouse gas. Whereas a biochemical understanding of aerobic methanotrophy is well developed, a mechanistic understanding of anaerobic methanotrophy has been prevented by the unavailability of pure cultures. Here we report a biochemical investigation of Methanosarcina acetivorans, a methane-producing species capable of anaerobic methanotrophic growth dependent on reduction of Fe(III). Our findings support a pathway anchored by Fe(III)-dependent mechanisms for energy conservation driving endergonic reactions that are key to methanotrophic growth. The pathway is remarkably similar to pathways hypothesized for uncultured anaerobic methanotrophic archaea. The results contribute to an improved understanding of the methane cycle that is paramount to understanding human interventions influencing Earth's climate. Finally, the pathway enables advanced development and optimization of biotechnologies converting methane to value-added products through metabolic engineering of M. acetivorans.

Indexed as

AnaerobiosisFerric CompoundsMetabolic Networks and PathwaysMethaneMethanosarcinaOxidation-ReductionFerric CompoundsMethane

Identifiers

PMID29691409
PMCPMC5915437

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.