Evidence map›Paper›PMID 29691192›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]

Identification of pathogenic and nonpathogenic Leptospira species of Brazilian isolates by Matrix Assisted Laser Desorption/Ionization and Time Flight mass spectrometry.

Daniel Karcher, Rafaella C Grenfell, Andrea Micke Moreno, Luisa Zanolli Moreno, Silvio Arruda Vasconcellos, Marcos B Heinemann, Joao N de Almeida Junior, Luiz Juliano, Maria A Juliano

Abstract readEvaluation Study
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. First Report onMicroorganisms · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Daniel KarcherUniversidade Federal de São Paulo, Escola Paulista Medicina, Departamento de Biofísica, São Paulo, SP, Brazil.
Rafaella C GrenfellUniversidade Federal de São Paulo, Escola Paulista Medicina, Departamento de Biofísica, São Paulo, SP, Brazil.
Andrea Micke MorenoUniversidade de São Paulo, Faculdade de Veterinária e Zootecnia, Departamento Medicina Veterinária Preventiva e Saúde Animal, São Paulo, SP, Brazil.
Luisa Zanolli MorenoUniversidade de São Paulo, Faculdade de Veterinária e Zootecnia, Departamento Medicina Veterinária Preventiva e Saúde Animal, São Paulo, SP, Brazil.
Silvio Arruda VasconcellosUniversidade de São Paulo, Faculdade de Veterinária e Zootecnia, Departamento Medicina Veterinária Preventiva e Saúde Animal, São Paulo, SP, Brazil.
Marcos B HeinemannUniversidade de São Paulo, Faculdade de Veterinária e Zootecnia, Departamento Medicina Veterinária Preventiva e Saúde Animal, São Paulo, SP, Brazil.
Joao N de Almeida JuniorUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo Laboratório de Micologia Médica Divisão de Laboratório Central - LIM-03, Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo, São Paulo, SP, Brazil.
Luiz JulianoUniversidade Federal de São Paulo, Escola Paulista Medicina, Departamento de Biofísica, São Paulo, SP, Brazil. Electronic address: ljuliano@terra.com.br.
Maria A JulianoUniversidade Federal de São Paulo, Escola Paulista Medicina, Departamento de Biofísica, São Paulo, SP, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Matrix Assisted Laser Desorption/Ionization and Time of Flight mass spectrometry (MALDI-TOF MS) is a powerful tool for the identification of bacteria through the detection and analysis of their proteins or fragments derived from ribosomes. Slight sequence variations in conserved ribosomal proteins distinguish microorganisms at the subspecies and strain levels. Characterization of Leptospira spp. by 16S RNA sequencing is costly and time-consuming, and recent studies have shown that closely related species (e.g., Leptospira interrogans and Leptospira kirschneri) may not be discriminated using this technology. Herein, we report an in-house Leptospira reference spectra database using Leptospira reference strains that were validated with a collection of well-identified Brazilian isolates kept in the Bacterial Zoonosis Laboratory at the Veterinary Preventive Medicine and Animal Health Department at Sao Paulo University. In addition, L. interrogans and L. kirschneri were differentiated using an in-depth mass spectrometry analysis with ClinProTools™ software. In conclusion, our in-house reference spectra database has the necessary accuracy to differentiate pathogenic and non-pathogenic species and to distinguish L. interrogans and L. kirschneri.

Indexed as

Bacterial Typing TechniquesBrazilDNA, BacterialHumansLeptospiraLeptospirosisRNA, Ribosomal, 16SSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTandem Mass SpectrometryDNA, BacterialRNA, Ribosomal, 16SBrazilIdentificationLeptospiraMALDI-TOFMass spectrometry

Identifiers

PMID29691192
PMCPMC6175718

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.