Evidence map›Paper›PMID 29689755›Full record

ArticleTechnology and health care : official journal of the European Society for Engineering and Medicine2018

Robust sparse accelerated failure time model for survival analysis.

Haiwei Shen, Hua Chai, Meiping Li, Zhiming Zhou, Yong Liang, Ziyi Yang, Haihui Huang, Xiaoying Liu, Bowen Zhang

Abstract read
In one paragraph

Article in Technology and health care : official journal of the European Society for Engineering and Medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Haiwei Shen
Hua Chai
Meiping Li
Zhiming Zhou
Yong Liang
Ziyi Yang
Haihui Huang
Xiaoying Liu
Bowen Zhang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To identify the bio-mark genes related to disease with high dimension and low sample size gene expression data, various regression approaches with different regularization methods have been proposed to solve this problem. Nevertheless, high-noises in biological data significantly reduce the performances of methods. The accelerated failure time (AFT) modelwas designed for gene selection and survival time estimation in cancer survival analysis. In this article, we proposed a novel robust sparse accelerated failure time model (RS-AFT) through combining the least absolute deviation (LAD) and Lq regularization. An iterative weighted linear programming algorithm without regularization parameter tuning was proposed to solve this RS-AFT model. The results of the experiments show our method has better performancebothin gene selection and survival time estimationthan some widely used regularization methods such as lasso, elastic net and SCAD. Hence we thought the RS-AFT model may be a competitive regularization method in cancer survival analysis.

Indexed as

AlgorithmsSurvival AnalysisCancer SurvivorsComputational BiologyComputer SimulationGene Expression ProfilingHumansNeoplasmsAFTregularizationsurvival analysis

Identifiers

PMID29689755
PMCPMC6004954

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.