Evidence map›Paper›PMID 29689099›Full record

ArticlePloS one2018

Glycan modifications to the gp120 immunogens used in the RV144 vaccine trial improve binding to broadly neutralizing antibodies.

Rachel C Doran, Gwen P Tatsuno, Sara M O'Rourke, Bin Yu, David L Alexander, Kathryn A Mesa, Phillip W Berman

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. The Association of the Polymorphisms in theInternational journal of molecular sciences · 2023
    Article
  3. Progress in the Development of Structure-Based Vaccines.Methods in molecular biology (Clifton, N.J.) · 2022
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Glycosylation in health and disease.Nature reviews. Nephrology · 2019
    Review
  9. Article
  10. Article
  11. Article
  12. Development of a Stable MGAT1Frontiers in immunology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Rachel C DoranDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, United States of America.ORCID 0000-0002-2032-1528
Gwen P TatsunoDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, United States of America.
Sara M O'RourkeDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, United States of America.
Bin YuDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, United States of America.
David L AlexanderDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, United States of America.
Kathryn A MesaDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, United States of America.
Phillip W BermanDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, United States of America.ORCID 0000-0003-2462-1592

Funding

Re-engineering gp120 to include glycan-dependent epitopesR01AI113893 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI BERMAN, PHILLIP WAYNE · 2014 to 2017
$4.2M
NIAID NIH HHS R01 AI113893NIH HHS R01AI113893
6 · The paper itself

Abstract

To date, the RV144 HIV vaccine trial has been the only study to show that immunization can confer protection from HIV infection. While encouraging, the modest 31.2% (P = 0.04) efficacy achieved in this study left significant room for improvement, and created an incentive to optimize the AIDSVAX B/E vaccine immunogens to increase the level of vaccine efficacy. Since the completion of the RV144 trial, our understanding of the antigenic structure of the HIV envelope protein, gp120, and of the specificity of broadly neutralizing monoclonal antibodies (bN-mAbs) that bind to it, has significantly improved. In particular, we have learned that multiple families of bN-mAbs require specific oligomannose glycans for binding. Both of the monomeric gp120 immunogens (MN- and A244-rgp120) in the AIDSVAX B/E vaccine used in the RV144 trial were enriched for glycans containing high levels of sialic acid, and lacked critical N-linked glycosylation sites required for binding by several families of bN-mAbs. The absence of these epitopes may have contributed to the low level of efficacy achieved in this study. In this report, we describe our efforts to improve the antigenic structure of the rgp120 immunogens used in the vaccine by optimizing glycan-dependent epitopes recognized by multiple bN-mAbs. Our results demonstrated that by shifting the location of one PNGS in A244-rgp120, and by adding two PNGS to MN-rgp120, in conjunction with the production of both proteins in a cell line that favors the incorporation of oligomannose glycans, we could significantly improve the binding by three major families of bN-mAbs. The immunogens described here represent a second generation of gp120-based vaccine immunogens that exhibit potential for use in RV144 follow-up studies.

Indexed as

AIDS VaccinesHIV Envelope Protein gp120Antibodies, NeutralizingBinding Sites, AntibodyCatalytic DomainClinical Trials as TopicGlycosylationHIV-1HIV InfectionsHumansImmunizationMutagenesis, Site-DirectedPolysaccharidesProtein BindingProtein EngineeringAIDS VaccinesAIDSVAX B-EAntibodies, NeutralizingHIV Envelope Protein gp120Polysaccharides

Identifiers

PMID29689099
PMCPMC5916523

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.