Evidence map›Paper›PMID 29688327›Full record

ArticlePathogens and disease2018

Structural and biochemical characterization of the protease domain of the mosaic botulinum neurotoxin type HA.

Kwok-Ho Lam, Stefan Sikorra, Jasmin Weisemann, Hannah Maatsch, Kay Perry, Andreas Rummel, Thomas Binz, Rongsheng Jin

Abstract read
In one paragraph

Article in Pathogens and disease, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kwok-Ho LamDepartment of Physiology and Biophysics, University of California, Irvine, CA 92697 USA.
Stefan SikorraInstitut für Zellbiochemie, Medizinische Hochschule Hannover, 30625 Hannover, Germany.
Jasmin WeisemannInstitut für Toxikologie, Medizinische Hochschule Hannover, 30625 Hannover, Germany.
Hannah MaatschInstitut für Zellbiochemie, Medizinische Hochschule Hannover, 30625 Hannover, Germany.
Kay PerryNE-CAT and Department of Chemistry and Chemical Biology, Cornell University, Argonne National Laboratory, Argonne, IL 60439, USA.
Andreas RummelInstitut für Toxikologie, Medizinische Hochschule Hannover, 30625 Hannover, Germany.
Thomas BinzInstitut für Zellbiochemie, Medizinische Hochschule Hannover, 30625 Hannover, Germany.
Rongsheng JinDepartment of Physiology and Biophysics, University of California, Irvine, CA 92697 USA.

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Molecular mechanisms of botulinum neurotoxin neutralizationR01AI125704 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI JIN, RONGSHENG, SHOEMAKER, CHARLES BIX · 2016 to 2020
$3.0M
Structural and functional studies of botulinum neurotoxinR01AI091823 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI JIN, RONGSHENG · 2012 to 2016
$2.0M
Structural mechanism for recognition of host receptor by botulinum neurotoxin AR21AI123920 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI JIN, RONGSHENG · 2016 to 2017
$425k
NIAID NIH HHS R01 AI091823NIAID NIH HHS R01 AI125704NIAID NIH HHS R21 AI123920NIH HHS P41 GM103403NIH HHS R01AI091823NIH HHS R01 AI125704NIH HHS R21AI123920
6 · The paper itself

Abstract

The extreme toxicity of botulinum neurotoxins (BoNTs) relies on their specific cleavage of SNARE proteins, which eventually leads to muscle paralysis. One newly identified mosaic toxin, BoNT/HA (aka H or FA), cleaves VAMP-2 at a unique position between residues L54 and E55, but the molecular basis underlying VAMP-2 recognition of BoNT/HA remains poorly characterized. Here, we report a ∼2.09 Å resolution crystal structure of the light chain protease domain of BoNT/HA (LC/HA). Structural comparison between LC/HA and LC of BoNT/F1 (LC/F1) reveals distinctive hydrophobic and electrostatic features near the active sites, which may explain their different VAMP-2 cleavage sites. When compared to BoNT/F5 that cleaves VAMP-2 at the same site as BoNT/HA, LC/HA displays higher affinity for VAMP-2, which could be caused by their different surface charge properties surrounding a VAMP-2 exosite-binding cleft. Furthermore, systematic mutagenesis studies on VAMP-2 and structural modeling demonstrate that residues R47 to K59 spanning the cleavage site in VAMP-2 may adopt a novel extended conformation when interacting with LC/HA and LC/F5. Taken together, our structure provides new insights into substrate recognition of BoNT/HA and paves the way for rational design of small molecule or peptide inhibitors against LC/HA.

Indexed as

Amino Acid SequenceBinding SitesBotulinum Toxins, Type ACloning, MolecularClostridium botulinumCrystallography, X-RayEscherichia coliGene ExpressionGenetic VectorsHydrophobic and Hydrophilic InteractionsModels, MolecularMutagenesisProtein BindingProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandProtein DomainsBotulinum Toxins, Type ARecombinant ProteinsVesicle-Associated Membrane Protein 2

Identifiers

PMID29688327
PMCPMC5961070

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.