Evidence map›Paper›PMID 29687222›Full record

ArticlePlanta2018

Trans-splicing of plastid rps12 transcripts, mediated by AtPPR4, is essential for embryo patterning in Arabidopsis thaliana.

Luca Tadini, Roberto Ferrari, Marie-Kristin Lehniger, Chiara Mizzotti, Fabio Moratti, Francesca Resentini, Monica Colombo, Alex Costa, Simona Masiero, Paolo Pesaresi

Abstract read
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In one paragraph

Article in Planta, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. P-Type Pentatricopeptide Repeat Proteins YS1 and YS2 Function in Splicing ofInternational journal of molecular sciences · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Plant organellar RNA maturation.The Plant cell · 2023
    Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Functions of PPR Proteins in Plant Growth and Development.International journal of molecular sciences · 2021
    Review
  13. Review
  14. Rerouting of ribosomal proteins into splicing in plant organelles.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Review
  17. Characteristics analysis of the completePhysiology and molecular biology of plants : an international journal of functional plant biology · 2020
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Luca TadiniDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Roberto FerrariDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Marie-Kristin LehnigerMolecular Genetics, Institute of Biology, Humboldt University of Berlin, Berlin, Germany.
Chiara MizzottiDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Fabio MorattiMax-Planck-Institut für Molekulare Pflanzenphysiologie, Potsdam-Golm, Germany.
Francesca ResentiniInstituto de Biologıa Molecular y Celular de Plantas (CSIC-Universidad Politécnica de Valencia), Valencia, Spain.
Monica ColomboCentro Ricerca e Innovazione, Fondazione Edmund Mach, San Michele all'Adige, Italy.
Alex CostaDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Simona MasieroDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy. simona.masiero@unimi.it.
Paolo PesaresiDipartimento di Scienze Agrarie e Ambientali - Produzione, Territorio, Agroenergia, Università degli studi di Milano, Milan, Italy. paolo.pesaresi@unimi.it.ORCID http://orcid.org/0000-0002-3236-7005

Funding

Fondazione Cariplo 2011-2257
6 · The paper itself

Abstract

MAIN

conclusionAtPPR4-mediated trans-splicing of plastid rps12 transcripts is essential for key embryo morphogenetic events such as development of cotyledons, determination of provascular tissue, and organization of the shoot apical meristem (SAM), but not for the formation of the protodermal layer. Members of the pentatricopeptide repeat (PPR) containing protein family have emerged as key regulators of the organelle post-transcriptional processing and to be essential for proper plant embryo development. In this study, we report the functional characterization of the AtPPR4 (At5g04810) gene encoding a plastid nucleoid PPR protein. In-situ hybridization analysis reveals the presence of AtPPR4 transcripts already at the transition stage of embryo development. As a consequence, embryos lacking the AtPPR4 protein arrest their development at the transition/early-heart stages and show defects in the determination of the provascular tissue and organization of SAM. This complex phenotype is due to the specific role of AtPPR4 in the trans-splicing of the plastid rps12 transcripts, as shown by northern and slot-blot hybridizations, and the consequent defect in 70S ribosome accumulation and plastid protein synthesis, in agreement with the role proposed for the maize orthologue, ZmPPR4.

Indexed as

Trans-SplicingArabidopsisArabidopsis ProteinsCotyledonIn Situ HybridizationMicroscopy, ConfocalPlant ProteinsPlastidsSeedsArabidopsis ProteinsPlant ProteinsRps12 protein, plantChloroplastEmbryo developmentPentatricopeptide repeat proteinProtein synthesisRNA metabolism

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.