Evidence map›Paper›PMID 29686076›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Elucidation of the trigonelline degradation pathway reveals previously undescribed enzymes and metabolites.

Nadia Perchat, Pierre-Loïc Saaidi, Ekaterina Darii, Christine Pellé, Jean-Louis Petit, Marielle Besnard-Gonnet, Véronique de Berardinis, Maeva Dupont, Alexandra Gimbernat, Marcel Salanoubat and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 44 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Review
  6. Genome-resolved analysis of Serratia marcescens strain SMTT infers niche specialization as a hydrocarbon-degrader.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. The First Step of Biodegradation of 7-Hydroxycoumarin inInternational journal of molecular sciences · 2021
    Article
  15. Purification and Characterization of NitFrontiers in bioengineering and biotechnology · 2021
    Article
  16. Microbial Degradation of Pyridine: a Complete Pathway inApplied and environmental microbiology · 2020
    Article
  17. Article
  18. Article
  19. Identification of evolutionary and kinetic drivers of NAD-dependent signaling.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Nadia PerchatGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Pierre-Loïc SaaidiGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Ekaterina DariiGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Christine PelléGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Jean-Louis PetitGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Marielle Besnard-GonnetGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Véronique de BerardinisGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Maeva DupontGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Alexandra GimbernatGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Marcel SalanoubatGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France.
Cécile FischerGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France fischer@genoscope.cns.fr aperret@genoscope.cns.fr.
Alain PerretGénomique métabolique, Genoscope, Institut François Jacob, Commissariat à l'Energie Atomique et aux Energies Alternatives, CNRS, Université Evry-Val-d'Essonne/Université Paris-Saclay, 91057 Evry, France fischer@genoscope.cns.fr aperret@genoscope.cns.fr.
Université Paris-Saclay · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRGenoscope · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trigonelline (TG;

Indexed as

AcinetobacterGenome, BacterialMolecular Sequence AnnotationMultigene FamilyAlkaloidsChromatography, LiquidMass SpectrometryAlkaloidstrigonellinebacterial metabolismfunctional genomicsLC/MS-OrbitrapN-heterocycle degradationtrigonelline

Identifiers

PMID29686076
PMCPMC5948990
OpenAlexW2801958344

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.