Evidence map›Paper›PMID 29685966›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2018

Excision of the doubly methylated base

Marina Alexeeva, Prashanna Guragain, Almaz N Tesfahun, Miglė Tomkuvienė, Aysha Arshad, Rūta Gerasimaitė, Audronė Rukšėnaitė, Giedrė Urbanavičiūtė, Magnar Bjørås, Jon K Laerdahl and 3 more

Open access · bronzeAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Shaping eukaryotic epigenetic systems by horizontal gene transfer.BioEssays : news and reviews in molecular, cellular and developmental biology · 2023
    Article
  2. Article
  3. Alleviation of C⋅C Mismatches in DNA by theFrontiers in microbiology · 2021
    Article
  4. Article
  5. Epigenetics: the first 25 centuries.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Marina AlexeevaDepartment of Chemistry, Bioscience and Environmental Technology-Centre for Organelle Research, Faculty of Science and Technology, University of Stavanger, PO Box 8600 Forus, 4021 Stavanger, Norway.
Prashanna GuragainDepartment of Chemistry, Bioscience and Environmental Technology-Centre for Organelle Research, Faculty of Science and Technology, University of Stavanger, PO Box 8600 Forus, 4021 Stavanger, Norway.ORCID 0000-0001-6502-9646
Almaz N TesfahunDepartment of Chemistry, Bioscience and Environmental Technology-Centre for Organelle Research, Faculty of Science and Technology, University of Stavanger, PO Box 8600 Forus, 4021 Stavanger, Norway.
Miglė TomkuvienėDepartment of Biological DNA Modification, Institute of Biotechnology, Vilnius University, Vilnius 10257, Lithuania.
Aysha ArshadDepartment of Chemistry, Bioscience and Environmental Technology-Centre for Organelle Research, Faculty of Science and Technology, University of Stavanger, PO Box 8600 Forus, 4021 Stavanger, Norway.
Rūta GerasimaitėDepartment of Biological DNA Modification, Institute of Biotechnology, Vilnius University, Vilnius 10257, Lithuania.
Audronė RukšėnaitėDepartment of Biological DNA Modification, Institute of Biotechnology, Vilnius University, Vilnius 10257, Lithuania.
Giedrė UrbanavičiūtėDepartment of Biological DNA Modification, Institute of Biotechnology, Vilnius University, Vilnius 10257, Lithuania.
Magnar BjøråsInstitute for Cancer Research and Molecular Medicine, Norwegian University of Science and Technology, Trondheim, Norway.
Jon K LaerdahlDepartment of Microbiology, Oslo University Hospital, Rikshospitalet, 0372 Oslo, Norway.
Arne KlunglandDepartment of Microbiology, Oslo University Hospital, Rikshospitalet, 0372 Oslo, Norway.
Saulius KlimašauskasDepartment of Biological DNA Modification, Institute of Biotechnology, Vilnius University, Vilnius 10257, Lithuania saulius.klimasauskas@bti.vu.lt.ORCID 0000-0002-1395-2030
Svein BjellandDepartment of Chemistry, Bioscience and Environmental Technology-Centre for Organelle Research, Faculty of Science and Technology, University of Stavanger, PO Box 8600 Forus, 4021 Stavanger, Norway svein.bjelland@uis.no.
University of Stavanger · NOVilnius University · LTOslo University Hospital · NO

Funding

Direct single nucleotide mapping of genomic CpG marksR21HG007200 · NHGRI · VILNIAUS UNIVERSITETAS · PI KLIMASAUSKAS, SAULIUS · 2013 to 2014
$296k
NHGRI NIH HHS R21 HG007200
6 · The paper itself

Abstract

Cytosine (C) in DNA is often modified to 5-methylcytosine (m

Indexed as

Epigenesis, Genetic5-MethylcytosineCytosineDeoxyribonuclease (Pyrimidine Dimer)DNA-Formamidopyrimidine GlycosylaseEscherichia coliEscherichia coli ProteinsHumansMethylation5-MethylcytosineCytosineDeoxyribonuclease (Pyrimidine Dimer)DNA-Formamidopyrimidine GlycosylaseDNA-formamidopyrimidine glycosylase, E coliEscherichia coli ProteinsN4,5-dimethylcytosineNei protein, E coli5-methylcytosine methylation damageDNA base excision repairepigeneticsN4,5-dimethylcytosine

Identifiers

PMID29685966
PMCPMC5915725
OpenAlexW2801568128

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.