Evidence map›Paper›PMID 29685684›Full record

ArticleBioorganic & medicinal chemistry2018

Characterization of Protease-Activated Receptor (PAR) ligands: Parmodulins are reversible allosteric inhibitors of PAR1-driven calcium mobilization in endothelial cells.

Disha M Gandhi, Mark W Majewski, Ricardo Rosas, Kaitlin Kentala, Trevor J Foster, Eric Greve, Chris Dockendorff

Open access · greenAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Disha M GandhiDepartment of Chemistry, Marquette University, P.O. Box 1881, Milwaukee, WI 53201-1881, USA.
Mark W MajewskiDepartment of Chemistry, Marquette University, P.O. Box 1881, Milwaukee, WI 53201-1881, USA.
Ricardo RosasDepartment of Chemistry, Marquette University, P.O. Box 1881, Milwaukee, WI 53201-1881, USA.
Kaitlin KentalaDepartment of Chemistry, Marquette University, P.O. Box 1881, Milwaukee, WI 53201-1881, USA.
Trevor J FosterDepartment of Chemistry, Marquette University, P.O. Box 1881, Milwaukee, WI 53201-1881, USA.
Eric GreveDepartment of Chemistry, Marquette University, P.O. Box 1881, Milwaukee, WI 53201-1881, USA.
Chris DockendorffDepartment of Chemistry, Marquette University, P.O. Box 1881, Milwaukee, WI 53201-1881, USA. Electronic address: christopher.dockendorff@mu.edu.
Marquette University · US

Funding

Novel Approaches to the Modulation of Protease-Activated Receptor (PAR) SignalingR15HL127636 · NHLBI · MARQUETTE UNIVERSITY · PI DOCKENDORFF, CHRISTOPHER · 2015 to 2020
$903k
NHLBI NIH HHS R15 HL127636
6 · The paper itself

Abstract

Several classes of ligands for Protease-Activated Receptors (PARs) have shown impressive anti-inflammatory and cytoprotective activities, including PAR2 antagonists and the PAR1-targeting parmodulins. In order to support medicinal chemistry studies with hundreds of compounds and to perform detailed mode-of-action studies, it became important to develop a reliable PAR assay that is operational with endothelial cells, which mediate the cytoprotective effects of interest. We report a detailed protocol for an intracellular calcium mobilization assay with adherent endothelial cells in multiwell plates that was used to study a number of known and new PAR1 and PAR2 ligands, including an alkynylated version of the PAR1 antagonist RWJ-58259 that is suitable for the preparation of tagged or conjugate compounds. Using the cell line EA.hy926, it was necessary to perform media exchanges with automated liquid handling equipment in order to obtain optimal and reproducible antagonist concentration-response curves. The assay is also suitable for study of PAR2 ligands; a peptide antagonist reported by Fairlie was synthesized and found to inhibit PAR2 in a manner consistent with reports using epithelial cells. The assay was used to confirm that vorapaxar acts as an irreversible antagonist of PAR1 in endothelium, and parmodulin 2 (ML161) and the related parmodulin RR-90 were found to inhibit PAR1 reversibly, in a manner consistent with negative allosteric modulation.

Indexed as

Platelet Aggregation InhibitorsAllosteric RegulationBenzamidesCalciumCell LineEndothelial CellsHumansIminesIndazolesLactonesLigandsOligopeptidesPhenylenediaminesPyridinesReceptor, PAR-1Receptor, PAR-2BenzamidesCalciumE 5555IminesIndazolesLactonesLigandsOligopeptidesPhenylenediaminesPlatelet Aggregation InhibitorsPyridinesReceptor, PAR-1Receptor, PAR-2RWJ 58259UreavorapaxarCalcium mobilizationGPCRML161Negative allosteric modulatorPAR1PAR2ParmodulinProtease-Activated ReceptorRWJ-58259Vorapaxar

Identifiers

PMID29685684
PMCPMC5937995
OpenAlexW2796249315

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.