Evidence map›Paper›PMID 29685105›Full record

ArticleBMC plant biology2018

Chilling-induced DNA Demethylation is associated with the cold tolerance of Hevea brasiliensis.

Xiao Tang, Qichao Wang, Hongmei Yuan, Xi Huang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
  2. Genomic Insights into Winter Wheat Breeding for Severely Cold Climates.International journal of molecular sciences · 2026
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  8. Review
  9. Epigenetics in the modern era of crop improvements.Science China. Life sciences · 2025
    Review
  10. Freeze-Dependent Physiological and Transcriptional Changes inInternational journal of molecular sciences · 2025
    Article
  11. Review
  12. Epigenetic responses of trees to environmental stress in the context of climate change.Biological reviews of the Cambridge Philosophical Society · 2025
    Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. DNA Methylation Variation Is a Possible Mechanism in the Response ofInternational journal of molecular sciences · 2022
    Article
  18. DNA Methylation in Plant Responses and Adaption to Abiotic Stresses.International journal of molecular sciences · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xiao TangHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Institute of Tropical Agriculture and Forestry, Hainan University, Renmin Rd. 58, Haikou, 570228, People's Republic of China.
Qichao WangHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Institute of Tropical Agriculture and Forestry, Hainan University, Renmin Rd. 58, Haikou, 570228, People's Republic of China.
Hongmei Yuan
Xi HuangHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Institute of Tropical Agriculture and Forestry, Hainan University, Renmin Rd. 58, Haikou, 570228, People's Republic of China. xihuang@hainu.edu.cn.ORCID http://orcid.org/0000-0002-3605-2692
Hainan University · CN

Funding

the National Natural Science Foundation of China 31370608the National Natural Science Foundation of China 31560197
6 · The paper itself

Abstract

backgroundLow temperature influences the development and latex production of rubber trees (Hevea brasiliensis) when extension to suboptimal high-latitude areas. The successful extension of Hevea brasiliensis cultivation to high-latitude areas has long believed to benefit from the breeding of cold-tolerant cultivars. A puzzling incongruity is the variation in cold tolerance among the cultivated clones despite their similar genetic make-up.

resultsTo investigate this, we first transferred cultivar Reyan 7-33-97 to short-term cold treatment, and showed that cold-related genes (such as HbICE1 and HbCBF2), cold-responsive (COR) genes, and DNA-methylation related genes (such as HbMET1) were induced by cold treatment. Furthermore, long-term cold treatment not only elevated the transcriptional activities of the HbICE1, HbCBF2, and HbMET, but also induced DNA demethylation of their promoters. Cold treatment increased the transcriptional activities of demethylation-related genes such as the HbDME, HbROS, and HbDML genes, but did not alter the promoter methylation status. Furthermore, the HbICE1 and HbMET promoters showed hypomethylation status in samples collected at the end of winter from 12 different cultivars grown in four geographical locations, but switched to hypermethylation status at the end of summer. Expression of COR was correlated with the low temperature. Given that little genetic diversity exists in the HbICE1 and HbMET promoters among different cultivars, the DNA demethylation induced by cold was highly correlated with low temperature, but not with the genetic backgrounds of cultivars.

conclusionCold-induced epigenetic modification might play an important role in cold tolerance of H. brasiliensis.

Indexed as

DNA DemethylationCold-Shock ResponseCold TemperatureCpG IslandsDNA MethylationGene Expression Regulation, PlantGenes, PlantGeographyHeveaPromoter Regions, GeneticSeasonsSequence Analysis, DNATranscriptomeCold toleranceDNA demethylationHbICE1HbMETHevea brasiliensis

Identifiers

PMID29685105
PMCPMC5913804
OpenAlexW2806477618

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.