Evidence map›Paper›PMID 29684280›Full record

ArticleBiochemistry2018

Discovery of a Kojibiose Phosphorylase in Escherichia coli K-12.

Keya Mukherjee, Tamari Narindoshvili, Frank M Raushel

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.6field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  4. Review
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  6. CompleteJournal of the American Chemical Society · 2024
    Article
  7. Genetic and enzymatic characterization of Amy13E fromApplied and environmental microbiology · 2024
    Article
  8. Discovery and Biotechnological Exploitation of Glycoside-Phosphorylases.International journal of molecular sciences · 2022
    Review
  9. Article
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  11. Article
  12. Review
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Keya MukherjeeDepartment of Biochemistry & Biophysics , Texas A&M University , College Station , Texas 77844 , United States.
Tamari NarindoshviliDepartment of Chemistry , Texas A&M University , College Station , Texas 77843 , United States.
Frank M RaushelDepartment of Biochemistry & Biophysics , Texas A&M University , College Station , Texas 77844 , United States.ORCID 0000-0002-5918-3089
Texas A&M University · US

Funding

Novel Biochemical Pathways for the Metabolism of Carbohydrates in the Human gut MicriobiomeR01GM122825 · NIGMS · TEXAS A&M UNIVERSITY · PI RAUSHEL, FRANK M. · 2018 to 2021
$1.3M
NIGMS NIH HHS R01 GM122825
6 · The paper itself

Abstract

The substrate profiles for three uncharacterized enzymes (YcjM, YcjT, and YcjU) that are expressed from a cluster of 12 genes ( ycjM-W and ompG) of unknown function in Escherichia coli K-12 were determined. Through a comprehensive bioinformatic and steady-state kinetic analysis, the catalytic function of YcjT was determined to be kojibiose phosphorylase. In the presence of saturating phosphate and kojibiose (α-(1,2)-d-glucose-d-glucose), this enzyme catalyzes the formation of d-glucose and β-d-glucose-1-phosphate ( k

Indexed as

Bacterial Outer Membrane ProteinsCatalysisDisaccharidesEscherichia coli K12Escherichia coli ProteinsGene Expression Regulation, BacterialGlucoseGlucosyltransferasesKineticsLipopolysaccharidesMannosephosphatesPorinsSubstrate SpecificityTeichoic AcidsalloseBacterial Outer Membrane ProteinsDisaccharidesEscherichia coli ProteinsGlucoseGlucosyltransferaseskojibioseLipopolysaccharideslipoteichoic acidmannose-6-phosphateMannosephosphatesOmpG protein, E coliPorinsTeichoic Acids

Identifiers

PMID29684280
PMCPMC5953851
OpenAlexW2801029017

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.