Evidence map›Paper›PMID 29684005›Full record

ArticlePLoS biology2018

In vivo clonal analysis reveals spatiotemporal regulation of thalamic nucleogenesis.

Samuel Z H Wong, Earl Parker Scott, Wenhui Mu, Xize Guo, Ella Borgenheimer, Madeline Freeman, Guo-Li Ming, Qing-Feng Wu, Hongjun Song, Yasushi Nakagawa

Abstract read
In one paragraph

Article in PLoS biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Perinatal development of structural thalamocortical connectivity.Imaging neuroscience (Cambridge, Mass.) · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Hypothalamic RaxNature communications · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Samuel Z H WongDepartment of Neuroscience and Mahoney Institute for Neurosciences, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Earl Parker ScottDepartment of Neuroscience, University of Minnesota Medical School, Minneapolis, Minnesota, United States of America.
Wenhui MuState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Xize GuoState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Ella BorgenheimerDepartment of Neuroscience, University of Minnesota Medical School, Minneapolis, Minnesota, United States of America.
Madeline FreemanDepartment of Neuroscience, University of Minnesota Medical School, Minneapolis, Minnesota, United States of America.
Guo-Li MingDepartment of Neuroscience and Mahoney Institute for Neurosciences, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Qing-Feng WuState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Hongjun SongDepartment of Neuroscience and Mahoney Institute for Neurosciences, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Yasushi NakagawaDepartment of Neuroscience, University of Minnesota Medical School, Minneapolis, Minnesota, United States of America.ORCID 0000-0003-4876-5718

Funding

Visual TestingP30EY011374 · NEI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI FERRINGTON, DEBORAH ANN · 1996 to 2019
$8.8M
Functional roles of genetic risk factors for brain disorders in neurogenesis and neurodevelopmentR35NS097370 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI MING, GUO-LI · 2017 to 2024
$6.7M
Translational models of neurodevelopmental epigenetics and disease using human iPSCsP01NS097206 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI HE, CHUAN · 2016 to 2020
$4.3M
Local circuitry mechanisms regulating adult hippocampal neurogenesisR37NS047344 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI SONG, HONGJUN · 2013 to 2019
$2.9M
Circuitry mechanisms underlying normal and aberrant adult hippocampal neurogenesisR01MH105128 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI MING, GUO-LI · 2014 to 2018
$2.0M
Deconstructing the hypothalmic ontogeny and plasticity via clonal analysisR21MH110160 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI MING, GUO-LI · 2016 to 2017
$444k
Deconstructing the cellular basis of thalamic nuclei specification by in vivo clonal analysisR21HD086820 · NICHD · JOHNS HOPKINS UNIVERSITY · PI NAKAGAWA, YASUSHI, SONG, HONGJUN · 2016 to 2017
$435k
NEI NIH HHS P30 EY011374NICHD NIH HHS R21 HD086820NIMH NIH HHS R01 MH105128NIMH NIH HHS R21 MH110160NINDS NIH HHS P01 NS097206NINDS NIH HHS R35 NS097370NINDS NIH HHS R37 NS047344
6 · The paper itself

Abstract

The thalamus, a crucial regulator of cortical functions, is composed of many nuclei arranged in a spatially complex pattern. Thalamic neurogenesis occurs over a short period during mammalian embryonic development. These features have hampered the effort to understand how regionalization, cell divisions, and fate specification are coordinated and produce a wide array of nuclei that exhibit distinct patterns of gene expression and functions. Here, we performed in vivo clonal analysis to track the divisions of individual progenitor cells and spatial allocation of their progeny in the developing mouse thalamus. Quantitative analysis of clone compositions revealed evidence for sequential generation of distinct sets of thalamic nuclei based on the location of the founder progenitor cells. Furthermore, we identified intermediate progenitor cells that produced neurons populating more than one thalamic nuclei, indicating a prolonged specification of nuclear fate. Our study reveals an organizational principle that governs the spatial and temporal progression of cell divisions and fate specification and provides a framework for studying cellular heterogeneity and connectivity in the mammalian thalamus.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBasic Helix-Loop-Helix ProteinsCell DifferentiationCell DivisionCell LineageCell TrackingClone CellsEmbryo, MammalianFemaleGenes, ReporterGreen Fluorescent ProteinsIntegrasesMiceMice, TransgenicNerve Tissue ProteinsBasic Helix-Loop-Helix ProteinsCre recombinaseGli1 protein, mouseGreen Fluorescent ProteinsIntegrasesNerve Tissue ProteinsNeurog1 protein, mouseOlig3 protein, mouseZinc Finger Protein GLI1

Identifiers

PMID29684005
PMCPMC5933804

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.