Evidence map›Paper›PMID 29681790›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2018

High-mass-resolution MALDI mass spectrometry imaging reveals detailed spatial distribution of metabolites and lipids in roots of barley seedlings in response to salinity stress.

Lenin D Sarabia, Berin A Boughton, Thusitha Rupasinghe, Allison M L van de Meene, Damien L Callahan, Camilla B Hill, Ute Roessner

Open access · hybridAbstract read
In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Lipid regulation inFrontiers in plant science · 2026
    Review
  6. Article
  7. Article
  8. Review
  9. The ins and outs of plant specialized metabolite gene organization.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Imaging plant metabolism in situ.Journal of experimental botany · 2024
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Lenin D SarabiaSchool of BioSciences, University of Melbourne, Parkville, VIC, 3010, Australia.
Berin A BoughtonMetabolomics Australia, School of BioSciences, University of Melbourne, Parkville, VIC, 3010, Australia. baboug@unimelb.edu.au.
Thusitha RupasingheMetabolomics Australia, School of BioSciences, University of Melbourne, Parkville, VIC, 3010, Australia.
Allison M L van de MeeneSchool of BioSciences, University of Melbourne, Parkville, VIC, 3010, Australia.
Damien L CallahanSchool of Life and Environmental Sciences, Centre for Chemistry and Biotechnology, Deakin University, 221 Burwood Highway, Burwood, VIC, 3125, Australia.
Camilla B HillSchool of Veterinary and Life Sciences, Murdoch University, Murdoch, WA, 6150, Australia.
Ute RoessnerSchool of BioSciences, University of Melbourne, Parkville, VIC, 3010, Australia.
University of Melbourne · AUDeakin University · AUMurdoch University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionMass spectrometry imaging (MSI) is a technology that enables the visualization of the spatial distribution of hundreds to thousands of metabolites in the same tissue section simultaneously. Roots are below-ground plant organs that anchor plants to the soil, take up water and nutrients, and sense and respond to external stresses. Physiological responses to salinity are multifaceted and have predominantly been studied using whole plant tissues that cannot resolve plant salinity responses spatially.

objectivesThis study aimed to use a comprehensive approach to study the spatial distribution and profiles of metabolites, and to quantify the changes in the elemental content in young developing barley seminal roots before and after salinity stress.

methodsHere, we used a combination of liquid chromatography-mass spectrometry (LC-MS), inductively coupled plasma mass spectrometry (ICP-MS), and matrix-assisted laser desorption/ionization (MALDI-MSI) platforms to profile and analyze the spatial distribution of ions, metabolites and lipids across three anatomically different barley root zones before and after a short-term salinity stress (150 mM NaCl).

resultsWe localized, visualized and discriminated compounds in fine detail along longitudinal root sections and compared ion, metabolite, and lipid composition before and after salt stress. Large changes in the phosphatidylcholine (PC) profiles were observed as a response to salt stress with PC 34:n showing an overall reduction in salt treated roots. ICP-MS analysis quantified changes in the elemental content of roots with increases of Na

conclusionOur results established the suitability of combining three mass spectrometry platforms to analyze and map ionic and metabolic responses to salinity stress in plant roots and to elucidate tolerance mechanisms in response to abiotic stress, such as salinity stress.

Indexed as

BarleyHordeum vulgare L.LipidsMALDIMetabolomicsSalinity stress

Identifiers

PMID29681790
PMCPMC5907631
OpenAlexW2801599732

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.