Evidence map›Paper›PMID 29678880›Full record

ArticleThe Journal of biological chemistry2018

Structural and thermodynamic insights into β-1,2-glucooligosaccharide capture by a solute-binding protein in

Koichi Abe, Naoki Sunagawa, Tohru Terada, Yuta Takahashi, Takatoshi Arakawa, Kiyohiko Igarashi, Masahiro Samejima, Hiroyuki Nakai, Hayao Taguchi, Masahiro Nakajima and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. New glycoside hydrolase families of β-1,2-glucanases.Protein science : a publication of the Protein Society · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 5 countries.

Koichi AbeFrom the Department of Biotechnology.
Naoki SunagawaDepartment of Biomaterial Sciences, Graduate School of Agricultural and Life Sciences, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
Tohru TeradaAgricultural Bioinformatics Research Unit, and.
Yuta Takahashithe Faculty of Agriculture, Niigata University, Niigata 950-2181, Japan.
Takatoshi ArakawaFrom the Department of Biotechnology.
Kiyohiko IgarashiDepartment of Biomaterial Sciences, Graduate School of Agricultural and Life Sciences, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
Masahiro SamejimaDepartment of Biomaterial Sciences, Graduate School of Agricultural and Life Sciences, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
Hiroyuki Nakaithe Faculty of Agriculture, Niigata University, Niigata 950-2181, Japan.
Hayao Taguchithe Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan.
Masahiro Nakajimathe Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan.
Shinya FushinobuFrom the Department of Biotechnology, asfushi@mail.ecc.u-tokyo.ac.jp.ORCID 0000-0003-1346-6435
The University of Tokyo · JPDepartment of Biotechnology · INNiigata University · JPTokyo University of Science · JPBioinformatics Institute · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

β-1,2-Glucans are bacterial carbohydrates that exist in cyclic or linear forms and play an important role in infections and symbioses involving Gram-negative bacteria. Although several β-1,2-glucan-associated enzymes have been characterized, little is known about how β-1,2-glucan and its shorter oligosaccharides (Sop

Indexed as

Bacterial Proteinsbeta-GlucansBinding SitesCrystallography, X-RayListeriaMolecular Dynamics SimulationPolysaccharides, BacterialProtein BindingProtein ConformationThermodynamicsBacterial Proteinsbeta-GlucansPolysaccharides, BacterialABC transportercarbohydrate-binding proteincarbohydrate metabolismisothermal titration calorimetry (ITC)molecular dynamicssolute-binding proteinsophorooligosaccharidesugar-binding proteinX-ray crystallographyβ-1,2-glucanβ-1,2-glucooligosaccharide

Identifiers

PMID29678880
PMCPMC5995521
OpenAlexW2800329820

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.