Evidence map›Paper›PMID 29676894›Full record

ArticleACS synthetic biology2018

Homogeneous Time Constants Promote Oscillations in Negative Feedback Loops.

Franco Blanchini, Christian Cuba Samaniego, Elisa Franco, Giulia Giordano

Abstract read
In one paragraph

Article in ACS synthetic biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Loop analysis of blood pressure/volume homeostasis.PLoS computational biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Franco BlanchiniDipartimento di Scienze Matematiche, Informatiche e Fisiche , Università degli Studi di Udine , 33100 Udine , Italy.
Christian Cuba SamaniegoDepartment of Mechanical Engineering , University of California at Riverside , Riverside , California 92521 , United States.
Elisa FrancoDepartment of Mechanical Engineering , University of California at Riverside , Riverside , California 92521 , United States.ORCID 0000-0003-1103-2668
Giulia GiordanoDelft Center for Systems and Control , Delft University of Technology , 2628 CD Delft , The Netherlands.ORCID 0000-0002-8600-1738

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological oscillators are present in nearly all self-regulating systems, from individual cells to entire organisms. In any oscillator structure, a negative feedback loop is necessary, but not sufficient to guarantee the emergence of periodic behaviors. The likelihood of oscillations can be improved by careful tuning of the system time constants and by increasing the loop gain, yet it is unclear whether there is any general relationship between optimal time constants and loop gain. This issue is particularly relevant in genetic oscillators resulting from a chain of different subsequent biochemical events, each with distinct (and uncertain) kinetics. Using two families of genetic oscillators as model examples, we show that the loop gain required for oscillations is minimum when all elements in the loop have the same time constant. On the contrary, we show that homeostasis is ensured if a single element is considerably slower than the others.

Indexed as

Models, BiologicalBiological ClocksFeedback, PhysiologicalKineticsTime Factorsbiomolecular oscillatorsdelaysfeedbackoscillationssynthetic biologytime constants

Identifiers

PMID29676894
PMCPMC6008730

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.