Evidence map›Paper›PMID 29676182›Full record

ArticleSAR and QSAR in environmental research2018

An evaluation of selected (Q)SARs/expert systems for predicting skin sensitisation potential.

J M Fitzpatrick, D W Roberts, G Patlewicz

Abstract readComparative Study
In one paragraph

Article in SAR and QSAR in environmental research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Safety Assessment ofToxics · 2026
    Article
  2. Review
  3. Review
  4. Article
  5. Frontiers in pharmacology · 2021
    Review
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

J M Fitzpatricka National Center for Computational Toxicology (NCCT) , US Environmental Protection Agency (US EPA), Research Triangle Park (RTP) , North Carolina , USA.ORCID http://orcid.org/0000-0002-5401-9706
D W Robertsb School of Pharmacy , Liverpool John Moores University , Liverpool , UK.ORCID http://orcid.org/0000-0001-6112-5868
G Patlewicza National Center for Computational Toxicology (NCCT) , US Environmental Protection Agency (US EPA), Research Triangle Park (RTP) , North Carolina , USA.ORCID http://orcid.org/0000-0003-3863-9689

Funding

Intramural EPA EPA999999
6 · The paper itself

Abstract

Predictive testing to characterise substances for their skin sensitisation potential has historically been based on animal models such as the Local Lymph Node Assay (LLNA) and the Guinea Pig Maximisation Test (GPMT). In recent years, EU regulations, have provided a strong incentive to develop non-animal alternatives, such as expert systems software. Here we selected three different types of expert systems: VEGA (statistical), Derek Nexus (knowledge-based) and TIMES-SS (hybrid), and evaluated their performance using two large sets of animal data: one set of 1249 substances from eChemportal and a second set of 515 substances from NICEATM. A model was considered successful at predicting skin sensitisation potential if it had at least the same balanced accuracy as the LLNA and the GPMT had in predicting the other outcomes, which ranged from 79% to 86%. We found that the highest balanced accuracy of any of the expert systems evaluated was 65% when making global predictions. For substances within the domain of TIMES-SS, however, balanced accuracies for the two datasets were found to be 79% and 82%. In those cases where a chemical was within the TIMES-SS domain, the TIMES-SS skin sensitisation hazard prediction had the same confidence as the result from LLNA or GPMT.

Indexed as

AnimalsAnimal Testing AlternativesDermatitis, Allergic ContactExpert SystemsGuinea PigsLocal Lymph Node AssayMiceQuantitative Structure-Activity RelationshipSkinStructure-Activity RelationshipDerek Nexusexpert system(Q)SARskin sensitisationTIMES-SSVEGA

Identifiers

PMID29676182
PMCPMC6077848

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.