Evidence map›Paper›PMID 29675741›Full record

ArticleJournal of the American Society for Mass Spectrometry2018

Collision Cross Sections and Ion Mobility Separation of Fragment Ions from Complex N-Glycans.

David J Harvey, Yasunori Watanabe, Joel D Allen, Pauline Rudd, Kevin Pagel, Max Crispin, Weston B Struwe

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Advancing Solutions to the Carbohydrate Sequencing Challenge.Journal of the American Chemical Society · 2019
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

David J HarveyTarget Discovery Institute, Nuffield Department of Medicine, University of Oxford, Roosevelt Drive, Oxford, OX3 7FZ, UK. david.harvey@ndm.ox.ac.uk.
Yasunori WatanabeBiological Sciences and the Institute for Life Sciences, University of Southampton, Southampton, SO17 1BJ, UK.
Joel D AllenBiological Sciences and the Institute for Life Sciences, University of Southampton, Southampton, SO17 1BJ, UK.
Pauline RuddNIBRT GlycoScience Group, The National Institute for Bioprocessing Research and Training, Dublin, Ireland.
Kevin PagelFritz Haber Institute of the Max Planck Society, Faradayweg 4-6, 14195, Berlin, Germany.
Max CrispinBiological Sciences and the Institute for Life Sciences, University of Southampton, Southampton, SO17 1BJ, UK.
Weston B StruweOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK. weston.struwe@chem.ox.ac.uk.ORCID http://orcid.org/0000-0003-0594-226X
University of Southampton · GBCentre for Human Genetics · GBFreie Universität Berlin · DENational Institute for Bioprocessing Research and Training · IEUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ion mobility mass spectrometry (IM-MS) holds great potential for structural glycobiology, in particular in its ability to resolve glycan isomers. Generally, IM-MS has largely been applied to intact glycoconjugate ions with reports focusing on the separation of different adduct types. Here, we explore IM separation and report the collision cross section (CCS) of complex type N-glycans and their fragments in negative ion mode following collision-induced dissociation (CID). CCSs of isomeric fragment ions were found, in some cases, to reveal structural details that were not present in CID spectra themselves. Many fragment ions were confirmed as possessing multiple structure, details of which could be obtained by comparing their drift time profiles to different glycans. By using fragmentation both before and after mobility separation, information was gathered on the fragmentation pathways producing some of the ions. These results help demonstrate the utility of IM and will contribute to the growing use of IM-MS for glycomics. Graphical Abstract ᅟ.

Indexed as

Carbohydrate ConformationCarbohydrate SequenceGlycomicsIon Mobility SpectrometryIonsPolysaccharidesTandem Mass SpectrometryIonsPolysaccharidesCollision cross sectionComplex N-glycansGlycomicsIon mobility

Identifiers

PMID29675741
OpenAlexW2801591477

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.