Evidence map›Paper›PMID 29674707›Full record

ArticleBritish journal of cancer2018

Targeted genomic landscape of metastases compared to primary tumours in clear cell metastatic renal cell carcinoma.

Guillermo de Velasco, Stephanie A Wankowicz, Russell Madison, Siraj M Ali, Craig Norton, Audrey Duquette, Jeffrey S Ross, Dominick Bossé, Aly-Khan A Lalani, Vincent A Miller and 6 more

Open access · hybridAbstract readComparative Study
In one paragraph

Article in British journal of cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 40 citations in OpenAlex.

  1. [Molecular characteristics for poor prognosis related renal cell carcinoma with lymph metastases].Beijing da xue xue bao. Yi xue ban = Journal of Peking University. Health sciences · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Sensitivity ofProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Guillermo de VelascoDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Stephanie A WankowiczDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Russell MadisonFoundation Medicine, Cambridge, MA, USA.
Siraj M AliFoundation Medicine, Cambridge, MA, USA.
Craig NortonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Audrey DuquetteDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Jeffrey S RossFoundation Medicine, Cambridge, MA, USA.
Dominick BosséDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Aly-Khan A LalaniDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Vincent A MillerFoundation Medicine, Cambridge, MA, USA.
Philip J StephensFoundation Medicine, Cambridge, MA, USA.
Lauren YoungFoundation Medicine, Cambridge, MA, USA.
A Ari HakimiMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Sabina SignorettiBrigham and Women's Hospital, Boston, MA, USA.
Sumanta K PalCity of Hope, Duarte, CA, USA.
Toni K ChoueiriDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA. Toni_Choueiri@dfci.harvard.edu.ORCID http://orcid.org/0000-0002-9201-3217
Dana-Farber Cancer Institute · USFoundation Medicine (United States)Brigham and Women's Hospital · USCity of Hope · USMemorial Sloan Kettering Cancer Center · USResearch Institute Hospital 12 de Octubre · ES

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

backgroundThe genomic landscape of primary clear cell renal cell carcinoma (ccRCC) has been well described. However, little is known about cohort genomic alterations (GA) landscape in ccRCC metastases, or how it compares to primary tumours in aggregate. The genomic landscape of metastases may have biological, clinical, and therapeutic implications.

methodsWe collected targeted next-generation sequencing mutation calls from two independent cohorts and described the metastases GA landscape and descriptively compared it to the GA landscape in primary tumours.

resultsThe cohort 1 (n = 578) consisted of 349 primary tumours and 229 metastases. Overall, the most common mutations in the metastases were VHL (66.8%), PBRM1 (41.87%), and SETD2 (24.7%). TP53 was more frequently mutated in metastases compared to primary tumours (14.85% versus 8.9%; p = 0.031). No other gene had significant difference in the cohort frequency of mutations between the metastases and primary tumours. Mutation burden was not significantly different between the metastases and primary tumours or between metastatic sites. The second cohort (n = 257) consisted of 177 primary tumours and 80 metastases. No differences in frequency of mutations or mutational burden were observed between primaries and metastases.

conclusionsThese data support the theory that ccRCC primary tumours and metastases encompass a uniform distribution of common genomic alterations tested by next-generation sequencing targeted panels. This study does not address variability between matched primary tumours and metastases or the change in genomic alterations over time and after sequential systemic therapies.

Indexed as

AdolescentAdultAgedAged, 80 and overCarcinoma, Renal CellChildCohort StudiesFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGenomicsHigh-Throughput Nucleotide SequencingHumansKidney NeoplasmsMaleMiddle Aged

Identifiers

PMID29674707
PMCPMC5943584
OpenAlexW2800869096

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.