Evidence map›Paper›PMID 29674564›Full record

ArticleScience (New York, N.Y.)2018

Observing the cell in its native state: Imaging subcellular dynamics in multicellular organisms.

Tsung-Li Liu, Srigokul Upadhyayula, Daniel E Milkie, Ved Singh, Kai Wang, Ian A Swinburne, Kishore R Mosaliganti, Zach M Collins, Tom W Hiscock, Jamien Shea and 17 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 288 papers.

0numbers the graph read from it
0cells of the map it votes in
288citing papers in PubMed
89.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

288 citing papers in PubMed, 586 citations in OpenAlex.

  1. Article
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  14. Polarization-engineered aberration-resilient light sheet microscopy.bioRxiv : the preprint server for biology · 2026
    Article
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  20. Review

228 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 7 institutions in 3 countries.

Tsung-Li LiuJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.ORCID 0000-0001-7965-4725
Srigokul UpadhyayulaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.ORCID 0000-0001-6727-5883
Daniel E MilkieJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.ORCID 0000-0002-3917-6965
Ved SinghJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Kai WangJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Ian A SwinburneDepartment of Systems Biology, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.ORCID 0000-0003-4162-0508
Kishore R MosaligantiDepartment of Systems Biology, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.
Zach M CollinsDepartment of Systems Biology, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.ORCID 0000-0002-8943-7967
Tom W HiscockDepartment of Systems Biology, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.
Jamien SheaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.ORCID 0000-0002-6674-1165
Abraham Q KohrmanDepartment of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY 11794-5215, USA.
Taylor N MedwigDepartment of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY 11794-5215, USA.
Daphne DambournetDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Ryan ForsterDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Brian CunniffDepartment of Cell Biology, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.ORCID 0000-0002-6035-2134
Yuan RuanHoward Hughes Medical Institute and Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Hanako YashiroHoward Hughes Medical Institute and Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.ORCID 0000-0001-5414-2096
Steffen ScholppLiving Systems Institute, College of Life and Environmental Sciences, University of Exeter, Exeter EX4 4QD, UK.ORCID 0000-0002-4903-9657
Elliot M MeyerowitzHoward Hughes Medical Institute and Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.ORCID 0000-0003-4798-5153
Dirk HockemeyerDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0002-5598-5092
David G DrubinDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0003-3002-6271
Benjamin L MartinDepartment of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY 11794-5215, USA.ORCID 0000-0001-5474-4492
David Q MatusDepartment of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY 11794-5215, USA.ORCID 0000-0002-1570-5025
Minoru KoyamaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.ORCID 0000-0002-9774-9223
Sean G MegasonDepartment of Systems Biology, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.ORCID 0000-0002-9330-2934
Tom KirchhausenJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Eric BetzigJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA. betzige@janelia.hhmi.org.ORCID 0000-0002-4192-1274
Howard Hughes Medical Institute · USHarvard University · USStony Brook University · USUniversity of California, Berkeley · USBoston Children's Hospital · USCalifornia Institute of Technology · USKarlsruhe Institute of Technology · DE

Funding

Nikon confocal system for improved spatio-dynamic analysis of endocytic trafficking eventsR35GM118149 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI DAVID G DRUBIN · 2016 to 2026
$12.0M
Dynamics of Clathrin Coat Formation in CellsR01GM075252 · NIGMS · IMMUNE DISEASE INSTITUTE, INC. · PI KIRCHHAUSEN, TOMAS · 2005 to 2018
$4.6M
Elucidating the mechanisms underlying cell cycle regulation of invasive behaviorR01GM121597 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI MATUS, DAVID · 2017 to 2021
$2.1M
The mechanism of inner ear pressure homeostasis by the endolymphatic sacR01DC015478 · NIDCD · HARVARD MEDICAL SCHOOL · PI MEGASON, SEAN G · 2017 to 2021
$2.0M
Telomerase function in human tumor and stem cell biologyR01CA196884 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI HOCKEMEYER, DIRK · 2015 to 2019
$1.7M
Elucidating the Gene Regulatory Networks that Specify Invasive BehaviorR00CA154870 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI MATUS, DAVID · 2014 to 2016
$737k
Computational Image Analysis for Cellular and Developmental BiologyR25GM103792 · NIGMS · MARINE BIOLOGICAL LABORATORY · PI DANUSER, GAUDENZ · 2013 to 2017
$297k
NCI NIH HHS R00 CA154870NCI NIH HHS R01 CA196884NIDCD NIH HHS R01 DC015478NIGMS NIH HHS R01 GM075252NIGMS NIH HHS R01 GM121597NIGMS NIH HHS R25 GM103792NIGMS NIH HHS R35 GM118149
6 · The paper itself

Abstract

True physiological imaging of subcellular dynamics requires studying cells within their parent organisms, where all the environmental cues that drive gene expression, and hence the phenotypes that we actually observe, are present. A complete understanding also requires volumetric imaging of the cell and its surroundings at high spatiotemporal resolution, without inducing undue stress on either. We combined lattice light-sheet microscopy with adaptive optics to achieve, across large multicellular volumes, noninvasive aberration-free imaging of subcellular processes, including endocytosis, organelle remodeling during mitosis, and the migration of axons, immune cells, and metastatic cancer cells in vivo. The technology reveals the phenotypic diversity within cells across different organisms and developmental stages and may offer insights into how cells harness their intrinsic variability to adapt to different physiological environments.

Indexed as

AnimalsCell MovementEndocytosisEyeHumansImaging, Three-DimensionalMicroscopyMitosisOrganellesSingle-Cell AnalysisZebrafish

Identifiers

PMID29674564
PMCPMC6040645
OpenAlexW2784692733

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.