Evidence map›Paper›PMID 29674435›Full record

ArticleG3 (Bethesda, Md.)2018

Phylogenetic and Phylogenomic Definition of

Andrii P Gryganskyi, Jacob Golan, Somayeh Dolatabadi, Stephen Mondo, Sofia Robb, Alexander Idnurm, Anna Muszewska, Kamil Steczkiewicz, Sawyer Masonjones, Hui-Ling Liao and 10 more

Erratum issuedAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. A chromosome-level genome assembly ofFrontiers in microbiology · 2026
    Article
  3. Studies in mycology · 2024
    Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Molecular mechanisms that govern infection and antifungal resistance in Mucorales.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Symbiotic and toxinogenicFrontiers in fungal biology · 2022
    Article
  15. Recent Advances and Future Directions in the Understanding of Mucormycosis.Frontiers in cellular and infection microbiology · 2022
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Case Report:Frontiers in medicine · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors.

Andrii P GryganskyiDepartment of Biology, Duke University, Durham, North Carolina, 27708 apg10@duke.edu.ORCID 0000-0002-6037-0092
Jacob GolanDepartment of Botany and Department of Bacteriology, University of Wisconsin-Madison, Madison, Wisconsin, 53706.
Somayeh DolatabadiWesterdijk Fungal Biodiversity Institute, Utrecht, The Netherlands, 3584.ORCID 0000-0003-3862-8912
Stephen MondoUS Department of Energy, Joint Genome Institute, Walnut Creek California, 94598.
Sofia RobbDepartment of Microbiology & Plant Pathology and Institute for Integrative Genome Biology, University of California Riverside, Riverside, California, 92521.
Alexander IdnurmSchool of BioSciences, University of Melbourne, Melbourne, Victoria, Australia, 3010.
Anna MuszewskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland, 02-106.ORCID 0000-0002-4578-844X
Kamil SteczkiewiczLaboratory of Bioinformatics and Systems Biology, Centre of New Technologies, University of Warsaw, Warsaw, Poland, 02-089.ORCID 0000-0002-6223-1694
Sawyer MasonjonesDepartment of Microbiology & Plant Pathology and Institute for Integrative Genome Biology, University of California Riverside, Riverside, California, 92521.
Hui-Ling LiaoNorth Florida Research and Educational Center, University of Florida, Quincy, Florida, 32351.
Michael T GajdeczkaDepartment of Biology, Duke University, Durham, North Carolina, 27708.
Felicia AnikeDepartment of Natural Resources and Environmental Design, North Carolina Agricultural and Technical State University, Greensboro, North Carolina, 27401.
Antonina VuekDepartment of Plant Protection, National University of Life and Environmental Sciences of Ukraine, Kyiv, Ukraine, 03041.
Iryna M AnishchenkoM.G. Kholodny Institute of Botany, National Academy of Sciences of Ukraine, Kyiv, Ukraine, 02000.
Kerstin VoigtLeibniz Institute for Natural Product Research and Infection Biology, Hans-Knöll Institute, Jena, Germany, 07745.
G Sybren de HoogWesterdijk Fungal Biodiversity Institute, Utrecht, The Netherlands, 3584.
Matthew E SmithDepartment of Plant Pathology, University of Florida, Gainesville, Florida, 32611.
Joseph HeitmanDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina, 27710.
Rytas VilgalysDepartment of Biology, Duke University, Durham, North Carolina, 27708.
Jason E StajichNorth Florida Research and Educational Center, University of Florida, Quincy, Florida, 32351.ORCID 0000-0002-7591-0020

Funding

Structure, function, and evolution of the Cryptococcus MAT locusR01AI050113 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 2002 to 2024
$8.5M
ROLE OF CALCINEURIN IN C. NEOFORMANS MATING AND FRUITINGR01AI039115 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 1997 to 2025
$6.7M
Genetics of Cryptococcus sexual reproductionR37AI039115 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 2011 to 2020
$4.9M
Acquisition of a Scalable Storage Cluster for Data Intensive NIH ResearchS10OD016290 · OD · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI GIRKE, THOMAS · 2014 to 2014
$593k
NIAID NIH HHS R01 AI039115NIAID NIH HHS R01 AI050113NIAID NIH HHS R37 AI039115NIH HHS S10 OD016290
6 · The paper itself

Abstract

Phylogenomic approaches have the potential to improve confidence about the inter-relationships of species in the order Mucorales within the fungal tree of life.

Indexed as

GenomicsPhylogenyDNA Transposable ElementsGenes, Mating Type, FungalGenome, FungalGenome SizeLikelihood FunctionsOpen Reading FramesRhizopusSpecies SpecificityWhole Genome SequencingDNA Transposable Elementsgenome duplicationorthologssexual reproductiontransposonszygomycete

Identifiers

PMID29674435
PMCPMC5982828

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.