Evidence map›Paper›PMID 29674394›Full record

ArticleGenes & development2018

Acetyl-CoA promotes glioblastoma cell adhesion and migration through Ca

Joyce V Lee, Corbett T Berry, Karla Kim, Payel Sen, Taehyong Kim, Alessandro Carrer, Sophie Trefely, Steven Zhao, Sully Fernandez, Lauren E Barney and 6 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 116 citations in OpenAlex.

  1. Review
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  11. ACSL4-mediated H3K9 and H3K27 hyperacetylation upregulates SNAIL to drive TNBC metastasis.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  15. bioRxiv : the preprint server for biology · 2024
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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Joyce V LeeDepartment of Cancer Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Corbett T BerryDepartment of Pathobiology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Karla KimDepartment of Cancer Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Payel SenPenn Epigenetics Institute, Department of Cell and Developmental Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Taehyong KimInstitute for Biomedical Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Alessandro CarrerDepartment of Cancer Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Sophie TrefelyDepartment of Cancer Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Steven ZhaoDepartment of Cancer Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Sully FernandezDepartment of Cancer Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Lauren E BarneyDepartment of Chemical Engineering, University of Massachusetts-Amherst, Amherst, Massachusetts 01003, USA.
Alyssa D SchwartzDepartment of Chemical Engineering, University of Massachusetts-Amherst, Amherst, Massachusetts 01003, USA.
Shelly R PeytonDepartment of Chemical Engineering, University of Massachusetts-Amherst, Amherst, Massachusetts 01003, USA.
Nathaniel W SnyderA.J. Drexel Autism Institute, Drexel University, Philadelphia, Pennsylvania 19104, USA.
Shelley L BergerPenn Epigenetics Institute, Department of Cell and Developmental Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Bruce D FreedmanDepartment of Pathobiology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Kathryn E WellenDepartment of Cancer Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.ORCID 0000-0002-2281-0042
Cancer Research Institute · USUniversity of Pennsylvania · USUniversity of Massachusetts Amherst · USDrexel University · US

Funding

University of Pennsylvania Postdoctoral Opportunities in Research and TeachingK12GM081259 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Janis K. Burkhardt · 2007 to 2026
$20.1M
Role of PCAF/GCN5 Acetylation on p53 TransactivationR01CA078831 · NCI · WISTAR INSTITUTE · PI BERGER, SHELLEY L · 1999 to 2022
$7.8M
CHEMISTRY-BIOLOGY INTERFACE PREDOCTORAL TRAINING GRANTST32GM008515 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI THOMPSON, LYNMARIE K. · 1995 to 2020
$4.3M
Role of acetyl-CoA in linking cancer cell metabolism and epigeneticsR01CA174761 · NCI · UNIVERSITY OF PENNSYLVANIA · PI WELLEN, KATHRYN ELAINE · 2014 to 2024
$3.6M
Tissue-specific stem cells and breast cancer tissue tropism in bioengineered microenvironmentsDP2CA186573 · NCI · UNIVERSITY OF MASSACHUSETTS AMHERST · PI PEYTON, SHELLY R. · 2013 to 2015
$2.6M
Prenatal biomarkers of exposure and individual susceptibility to endocrine disrupting compoundsK22ES026235 · NIEHS · DREXEL UNIVERSITY · PI SNYDER, NATHANIEL W. · 2016 to 2018
$485k
Role of Akt-regulated acetyl-CoA metabolism in altering the cancer cell epigenomeF31CA189744 · NCI · UNIVERSITY OF PENNSYLVANIA · PI LEE, JOYCE VIVIAN · 2015 to 2016
$87k
Metabolic rewiring regulates cancer growth and tumor-associated immune responsesF99CA222741 · NCI · UNIVERSITY OF PENNSYLVANIA · PI ZHAO, STEVEN · 2017 to 2018
$77k
NCI NIH HHS DP2 CA186573NCI NIH HHS F31 CA189744NCI NIH HHS F99 CA222741NCI NIH HHS R01 CA078831NCI NIH HHS R01 CA174761NIEHS NIH HHS K22 ES026235NIGMS NIH HHS K12 GM081259NIGMS NIH HHS T32 GM008515
6 · The paper itself

Abstract

The metabolite acetyl-coenzyme A (acetyl-CoA) is the required acetyl donor for lysine acetylation and thereby links metabolism, signaling, and epigenetics. Nutrient availability alters acetyl-CoA levels in cancer cells, correlating with changes in global histone acetylation and gene expression. However, the specific molecular mechanisms through which acetyl-CoA production impacts gene expression and its functional roles in promoting malignant phenotypes are poorly understood. Here, using histone H3 Lys27 acetylation (H3K27ac) ChIP-seq (chromatin immunoprecipitation [ChIP] coupled with next-generation sequencing) with normalization to an exogenous reference genome (ChIP-Rx), we found that changes in acetyl-CoA abundance trigger site-specific regulation of H3K27ac, correlating with gene expression as opposed to uniformly modulating this mark at all genes. Genes involved in integrin signaling and cell adhesion were identified as acetyl-CoA-responsive in glioblastoma cells, and we demonstrate that ATP citrate lyase (ACLY)-dependent acetyl-CoA production promotes cell migration and adhesion to the extracellular matrix. Mechanistically, the transcription factor NFAT1 (nuclear factor of activated T cells 1) was found to mediate acetyl-CoA-dependent gene regulation and cell adhesion. This occurs through modulation of Ca

Indexed as

Calcium SignalingCell AdhesionCell MovementAcetylationAcetyl Coenzyme AAnimalsATP Citrate (pro-S)-LyaseCell Line, TumorFemaleGene Expression Regulation, NeoplasticGlioblastomaGlucoseHistonesMice, NudeNFATC Transcription FactorsAcetyl Coenzyme AATP Citrate (pro-S)-LyaseGlucoseHistonesNFATC Transcription Factorsacetyl-CoAcalciumglioblastomahistone acetylationmetabolismNFAT1

Identifiers

PMID29674394
PMCPMC5959234
OpenAlexW2801830143

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.