Evidence map›Paper›PMID 29670059›Full record

ArticleViruses2018

Variability Studies of Two

Igor Koloniuk, Tatiana Sarkisova, Karel Petrzik, Ondřej Lenz, Jaroslava Přibylová, Jana Fránová, Josef Špak, Leonidas Lotos, Christina Beta, Asimina Katsiani and 2 more

Abstract readComparative Study
In one paragraph

Article in Viruses, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Igor KoloniukDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., 370 05 České Budějovice, Czech Republic. koloniuk@umbr.cas.cz.ORCID 0000-0002-5893-6683
Tatiana SarkisovaDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., 370 05 České Budějovice, Czech Republic. sarkisova@umbr.cas.cz.
Karel PetrzikDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., 370 05 České Budějovice, Czech Republic. petrzik@umbr.cas.cz.ORCID 0000-0001-9668-1223
Ondřej LenzDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., 370 05 České Budějovice, Czech Republic. lenz@umbr.cas.cz.
Jaroslava PřibylováDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., 370 05 České Budějovice, Czech Republic. pribyl@umbr.cas.cz.
Jana FránováDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., 370 05 České Budějovice, Czech Republic. jana@umbr.cas.cz.ORCID 0000-0001-8451-1454
Josef ŠpakDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., 370 05 České Budějovice, Czech Republic. spak@umbr.cas.cz.
Leonidas LotosLaboratory of Plant Pathology, School of Agriculture, Faculty of Agriculture, Forestry and Natural Environment, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece. llotos@agro.auth.gr.
Christina BetaLaboratory of Plant Pathology, School of Agriculture, Faculty of Agriculture, Forestry and Natural Environment, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece. chrismpeta@agro.auth.gr.
Asimina KatsianiLaboratory of Plant Pathology, School of Agriculture, Faculty of Agriculture, Forestry and Natural Environment, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece. meniakats@yahoo.gr.
Thierry CandresseUMR 1332 Biologie du Fruit et Pathologie, INRA, University of Bordeaux, CS20032, F-33882 Villenave d'Ornon CEDEX, France. thierry.candresse@inra.fr.
Varvara I MaliogkaLaboratory of Plant Pathology, School of Agriculture, Faculty of Agriculture, Forestry and Natural Environment, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece. vmaliogk@agro.auth.gr.ORCID 0000-0001-5714-2710

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During their lifetime, perennial woody plants are expected to face multiple infection events. Furthermore, multiple genotypes of individual virus species may co-infect the same host. This may eventually lead to a situation where plants harbor complex communities of viral species/strains. Using high-throughput sequencing, we describe co-infection of sweet and sour cherry trees with diverse genomic variants of two closely related viruses, namely prunus virus F (PrVF) and cherry virus F (CVF). Both viruses are most homologous to members of the

Indexed as

Genetic VariationFabavirusGene Expression ProfilingGenome, ViralHigh-Throughput Nucleotide SequencingPlant DiseasesPrunusfabavirushigh-throughput sequencingintrahost variabilitynovel speciesphylogeneticsplant virusprunus

Identifiers

PMID29670059
PMCPMC5923498

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.