Evidence map›Paper›PMID 29669519›Full record

ArticleBMC microbiology2018

Molecular characterization and new genotypes of Enterocytozoon bieneusi in pet chipmunks (Eutamias asiaticus) in Sichuan province, China.

Lei Deng, Wei Li, Zhijun Zhong, Yijun Chai, Leli Yang, Hang Zheng, Wuyou Wang, Hualin Fu, Min He, Xiangming Huang and 7 more

Abstract read
In one paragraph

Article in BMC microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. PCR-based detection ofFrontiers in cellular and infection microbiology · 2025
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  3. Molecular prevalence and genotype identification ofFrontiers in veterinary science · 2024
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  8. Prevalence and new genotypes ofInternational journal for parasitology. Parasites and wildlife · 2022
    Article
  9. Article
  10. Prevalence and genotyping distribution ofFrontiers in microbiology · 2022
    Article
  11. Chronic Infections in Mammals Due to Microsporidia.Experientia supplementum (2012) · 2022
    Article
  12. Molecular Detection ofFrontiers in cellular and infection microbiology · 2021
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  13. Article
  14. Article
  15. Article
  16. Alternatives in Molecular Diagnostics ofJournal of fungi (Basel, Switzerland) · 2020
    Review
  17. Article
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  19. Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

17 authors.

Lei DengThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.ORCID 0000-0003-0391-6180
Wei LiThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Zhijun ZhongThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Yijun ChaiThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Leli YangThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Hang ZhengThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Wuyou WangThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Hualin FuThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Min HeThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Xiangming HuangChengdu Giant Panda Breeding Research Base, Province, Chengdu, 625001, Sichuan, China.
Zhicai ZuoThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Ya WangThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Suizhong CaoThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Haifeng LiuThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Xiaoping MaThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China.
Kongju WuChengdu Giant Panda Breeding Research Base, Province, Chengdu, 625001, Sichuan, China.
Guangneng PengThe Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Province, Chengdu, 611130, Sichuan, China. pgn.sicau@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundEnterocytozoon bieneusi, the most commonly identified microsporidian species in humans, is also identified in livestock, birds, rodents, reptiles, companion animals, even wastewater. However, there is no information available on occurrence of E. bieneusi in pet chipmunks. The aim of the present study was to determine the genotypes, molecular characterization of E. bieneusi in pet chipmunks, and assess the zoonotic potential.

resultsA total of 279 fecal specimens were collected from chipmunks from seven pet shops and one breeding facility in Sichuan province, China. The prevalence for E. bieneusi was 17.6% (49/279) based on nested PCR targeting the internal transcribed spacer (ITS) region. The prevalence of E. bieneusi in chipmunks < 90 days of age was significantly higher than that in older chipmunks; however, differences among different sources and between genders were not significant. Eight genotypes of E. bieneusi were identified, including four known genotypes (D, Nig7, CHG9, and CHY1) and four novel genotypes (SCC-1 to 4). Phylogenetic analysis classified these genotypes into four distinct groups as follows: genotypes D and CHG9 clustered into group 1 of zoonotic potential; genotypes Nig7 and CHY1 clustered into group 6 and a new group, respectively; the four novel genotypes (SCC-1 to 4) formed a separate group named group 10.

conclusionsTo the best of our knowledge, this is the first study reporting the prevalence and genotypes of E. bieneusi in pet chipmunks in China. Genotypes D and Nig7, found in chipmunks in this study, have also been previously identified in humans, which suggests that chipmunks might play a role in the transmission of this pathogen to humans.

Indexed as

GenotypePhylogenyAnimalsChinaCluster AnalysisDNA, FungalEnterocytozoonFecesFemaleGenes, rRNAGenetic VariationMaleMicrosporidiosisPolymerase Chain ReactionPrevalenceSciuridaeDNA, FungalChipmunksEnterocytozoon bieneusiGenotypePrevalenceZoonotic potential

Identifiers

PMID29669519
PMCPMC5907217

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.