Evidence map›Paper›PMID 29668719›Full record

ArticlePloS one2018

Spatial alterations of De Novo purine biosynthetic enzymes by Akt-independent PDK1 signaling pathways.

Danielle L Schmitt, Anand Sundaram, Miji Jeon, Bao Tran Luu, Songon An

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. A journey into the regulatory secrets of theFrontiers in pharmacology · 2024
    Review
  6. The Purinosome: A Case Study for a Mammalian Metabolon.Annual review of biochemistry · 2022
    Review
  7. Review
  8. Human de novo purine biosynthesis.Critical reviews in biochemistry and molecular biology · 2021
    Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Danielle L SchmittDepartment of Chemistry and Biochemistry, University of Maryland Baltimore County (UMBC), Baltimore, Maryland, United States of America.
Anand SundaramDepartment of Chemistry and Biochemistry, University of Maryland Baltimore County (UMBC), Baltimore, Maryland, United States of America.
Miji JeonDepartment of Chemistry and Biochemistry, University of Maryland Baltimore County (UMBC), Baltimore, Maryland, United States of America.
Bao Tran LuuDepartment of Chemistry and Biochemistry, University of Maryland Baltimore County (UMBC), Baltimore, Maryland, United States of America.
Songon AnDepartment of Chemistry and Biochemistry, University of Maryland Baltimore County (UMBC), Baltimore, Maryland, United States of America.ORCID 0000-0003-2189-7374
University of Maryland, Baltimore County · US

Funding

Graduate Training at The Chemistry Biology InterfaceT32GM066706 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SELEY-RADTKE, KATHERINE L, SMITH, AARON T · 2004 to 2023
$3.3M
A Multienzyme Metabolic Complex for Glucose MetabolismR01GM125981 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI AN, SONGON · 2018 to 2022
$1.4M
NIGMS NIH HHS R01 GM125981NIGMS NIH HHS T32 GM066706
6 · The paper itself

Abstract

A macromolecular complex of the enzymes involved in human de novo purine biosynthesis, the purinosome, has been shown to consist of a core assembly to regulate the metabolic activity of the pathway. However, it remains elusive whether the core assembly itself can be selectively controlled in the cytoplasm without promoting the purinosome. Here, we reveal that pharmacological inhibition of the cytoplasmic activity of 3-phosphoinositide-dependent protein kinase 1 (PDK1) selectively promotes the formation of the core assembly, but not the purinosome, in cancer cells. However, alternative signaling cascades that are associated with the plasma membrane-bound PDK1 activity, including Akt-mediated cascades, regulate neither the core assembly nor the purinosome in our conditions. Along with immunofluorescence microscopy and a knock-down study against PDK1 using small interfering RNAs, we reveal that cytoplasmic PDK1-associated signaling pathways regulate subcellular colocalization of three enzymes that form the core assembly of the purinosome in an Akt-independent manner. Collectively, this study reveals a new mode of compartmentalization of purine biosynthetic enzymes controlled by spatially resolved signaling pathways.

Indexed as

Signal Transduction3-Phosphoinositide-Dependent Protein KinasesBiomarkersCell MembraneFluorescent Antibody TechniqueGene Knockdown TechniquesHeLa CellsHumansImmunohistochemistryMetabolic Networks and PathwaysMitochondriaPhosphatidylinositol 3-KinasesPhosphoinositide-3 Kinase InhibitorsProtein Kinase CProtein Kinase InhibitorsProto-Oncogene Proteins c-akt3-Phosphoinositide-Dependent Protein KinasesBiomarkersPDPK1 protein, humanPhosphatidylinositol 3-KinasesPhosphoinositide-3 Kinase InhibitorsProtein Kinase CProtein Kinase InhibitorsProto-Oncogene Proteins c-aktPurinesTOR Serine-Threonine Kinases

Identifiers

PMID29668719
PMCPMC5905998
OpenAlexW2801860141

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.