Evidence map›Paper›PMID 29667164›Full record

ArticleJournal of the American Society for Mass Spectrometry2018

Exploring the Sea Urchin Neuropeptide Landscape by Mass Spectrometry.

Eric B Monroe, Suresh P Annangudi, Andinet A Wadhams, Timothy A Richmond, Ning Yang, Bruce R Southey, Elena V Romanova, Liliane Schoofs, Geert Baggerman, Jonathan V Sweedler

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Peptidomics.Nature reviews. Methods primers · 2023
    Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Eric B MonroeDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Suresh P AnnangudiDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Andinet A WadhamsDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Timothy A RichmondDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Ning YangDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Bruce R SoutheyDepartment of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Elena V RomanovaDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Liliane SchoofsFunctional Genomics and Proteomics Unit, KU Leuven, 3000, Leuven, Belgium.
Geert BaggermanProMeta Interfacultary Center for Proteomics and Metabolomics, KU Leuven, 3000, Leuven, Belgium.
Jonathan V SweedlerDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA. jsweedle@illinois.edu.
University of Illinois Urbana-Champaign · USKU Leuven · BE

Funding

The UIUC Neuroproteomics Center on Cell-Cell SignalingP30DA018310 · NIDA · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI Elena V Romanova · 2004 to 2026
$24.9M
SUBCELLULAR CHARACTERIZATION OF NEUROTRANSMITTERSR01NS031609 · NINDS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI SWEEDLER, JONATHAN V. · 1998 to 2022
$6.2M
NIDA NIH HHS P30 DA018310NINDS NIH HHS R01 NS031609
6 · The paper itself

Abstract

Neuropeptides are essential cell-to-cell signaling messengers and serve important regulatory roles in animals. Although remarkable progress has been made in peptide identification across the Metazoa, for some phyla such as Echinodermata, limited neuropeptides are known and even fewer have been verified on the protein level. We employed peptidomic approaches using bioinformatics and mass spectrometry (MS) to experimentally confirm 23 prohormones and to characterize a new prohormone in nervous system tissue from Strongylocentrotus purpuratus, the purple sea urchin. Ninety-three distinct peptides from known and novel prohormones were detected with MS from extracts of the radial nerves, many of which are reported or experimentally confirmed here for the first time, representing a large-scale study of neuropeptides from the phylum Echinodermata. Many of the identified peptides and their precursor proteins have low homology to known prohormones from other species/phyla and are unique to the sea urchin. By pairing bioinformatics with MS, the capacity to characterize novel peptides and annotate prohormone genes is enhanced. Graphical Abstract.

Indexed as

Amino Acid SequenceAnimalsHormonesNeuropeptidesProteomicsSea UrchinsSpectrometry, Mass, Electrospray IonizationTandem Mass SpectrometryHormonesNeuropeptidesBioinformaticsMass spectrometryNeuropeptidesPeptidomicsSea urchin

Identifiers

PMID29667164
PMCPMC5943159
OpenAlexW2800437827

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.