ArticleJournal of genetics2018
Identification of virulence factors and type III effectors of phylotype I, Indian Ralstonia solanacearum strains Rs-09-161 and Rs-10-244.
Article in Journal of genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
6 citing papers in PubMed, 6 citations in OpenAlex.
- The SlCBL-SlCML24 module mediates silicon-enhanced resistance to bacterial wilt in Solanum lycopersicum.Plant cell reports · 2026Article
- Comprehensive genome sequence analysis ofFrontiers in microbiology · 2024Article
- Draft genome sequencing data of the bacterial wilt,Data in brief · 2023Article
- Comprehensive Analysis Reveals the Genetic and Pathogenic Diversity ofFrontiers in microbiology · 2022Article
- Article
- Development of T3SS Mutants (Indian journal of microbiology · 2018Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Ralstonia solanacearum is a well-known phytopathogen causing bacterial wilt in a large number of agriculturally important crops. The pathogenicity of R. solanacearum is expressed due to the presence of various virulence factors and effector proteins. In this study, various virulence factors and type III effector proteins of R. solanacearum that are present in the strains Rs-09-161 and Rs-10-244 were identified through bioinformatics approach and compared with other reference strains. R. solanacearum strains, Rs-09-161 and Rs-10-244 belong to the phylotype I, biovar3, and are the only sequenced strains from India infecting solanaceous vegetables. Similarity matrix obtained by comparing the sequences of virulence genes of Rs-09-161 and Rs-10-244 with other reference strains indicated that Rs-09-161 and Rs-10-244 share more than 99% similarity between them and are closely related to GMI1000. The virulence factors in R. solanacearum appear to be highly conserved in the R. solanacearum species complex. Rs-09-161 has 72 type III effectors whereas Rs-10-244 has 77. Comparison of the complete genes of type III effectors of Rs-09-161,Rs-10-244 andGMI1000 revealed the presence of 60 common effectors within them. Further,Rs-09-161 has two unique effectors and Rs-10-244 has four unique effectors. Phylogenetic trees of RipA, RipG, RipH and RipS effector sequences resulted in the grouping of the isolates based on their phylotypes. Group 1 consists of strains that belong to phylotype I including Rs-09-161 and Rs-10-244. Phylotype III strain CMR15 forms a group closely associated with phylotype I. The strains belonging to phylotypes II and IV have separated to form two different groups.
Indexed as
Identifiers
29666325W2789763731What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.