Evidence map›Paper›PMID 29664901›Full record

ArticlePLoS neglected tropical diseases2018

Genetic profiling of Mycobacterium bovis strains from slaughtered cattle in Eritrea.

Michael Kahsay Ghebremariam, Tiny Hlokwe, Victor P M G Rutten, Alberto Allepuz, Simeon Cadmus, Adrian Muwonge, Suelee Robbe-Austerman, Anita L Michel

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. First report of whole genome sequence of a Mycobacterium bovis (3/86Rv) strain isolated from a cow in India.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  3. Article
  4. Article
  5. Spoligotype analysis ofZoonoses and public health · 2022
    Article
  6. Review
  7. Article
  8. Article
  9. Genomic and temporal analyses ofMicrobial genomics · 2021
    Article
  10. Article
  11. Multispacer Sequence Typing forFrontiers in veterinary science · 2021
    Article
  12. Microorganisms · 2020
    Review
  13. Article
  14. Global Distribution and Evolution ofFrontiers in microbiology · 2020
    Article
  15. Genotype Diversity ofFrontiers in veterinary science · 2020
    Article
  16. Article
  17. Whole Genome Sequencing for Determining the Source ofFrontiers in veterinary science · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 7 institutions in 7 countries.

Michael Kahsay GhebremariamDepartment of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Yalelaan 1, TD Utrecht, The Netherlands.ORCID 0000-0001-5738-8235
Tiny HlokweAgricultural Research Council-Onderstepoort Veterinary Research (ARC-OVR), Diagnostic Services Programme, Onderstepoort, South Africa.
Victor P M G RuttenDepartment of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Yalelaan 1, TD Utrecht, The Netherlands.
Alberto AllepuzUAB, Centre de Recerca en Sanitat Animal (CReSA, IRTA-UAB), Campus de la Universitat Autònoma de Barcelona, Bellaterra, Spain.
Simeon CadmusDepartment of Veterinary Public Health and Preventive Medicine, University of Ibadan, Nigeria.
Adrian MuwongeDivision of Genetics and Genomics, The Roslin Institute and the Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian, United Kingdom.
Suelee Robbe-AustermanNational Veterinary Services Laboratories, United States Department of Agriculture, Ames, Iowa, United States of America.
Anita L MichelDepartment of Veterinary Tropical Diseases, Bovine Tuberculosis and Brucellosis Research Programme, Faculty of Veterinary Science, University of Pretoria, Onderstepoort, South Africa.
Utrecht University · NLOnderstepoort Veterinary Academic Hospital · ZAOnderstepoort Veterinary Institute · ZARoslin Institute · GBUnited States Department of Agriculture · USUniversitat Autònoma de Barcelona · ESUniversity of Ibadan · NG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycobacterium bovis (M.bovis) is the main causative agent for bovine tuberculosis (BTB) and can also be the cause of zoonotic tuberculosis in humans. In view of its zoonotic nature, slaughterhouse surveillance, potentially resulting in total or partial condemnation of the carcasses and organs, is conducted routinely. Spoligotyping, VNTR profiling, and whole genome sequencing (WGS) of M. bovis isolated from tissues with tuberculosis-like lesions collected from 14 cattle at Eritrea's largest slaughterhouse in the capital Asmara, were conducted.The 14 M. bovis isolates were classified into three different spoligotype patterns (SB0120, SB0134 and SB0948) and six VNTR profiles. WGS results matched those of the conventional genotyping methods and further discriminated the six VNTR profiles into 14 strains. Furthermore, phylogenetic analysis of the M. bovis isolates suggests two independent introductions of BTB into Eritrea possibly evolving from a common ancestral strain in Europe.This molecular study revealed the most important strains of M. bovis in Eritrea and their (dis)similarities with the strains generally present in East Africa and Europe, as well as potential routes of introduction of M. bovis. Though the sample size is small, the current study provides important information as well as platform for future in-depth molecular studies on isolates from both the dairy and the traditional livestock sectors in Eritrea and the region. This study provides information onthe origin of some of the M. bovis strains in Eritrea, its genetic diversity, evolution and patterns of spread between dairy herds. Such information is essential in the development and implementation of future BTB control strategy for Eritrea.

Indexed as

AbattoirsAnimalsBacterial Typing TechniquesCattleEuropeFemaleGenetic VariationMaleMinisatellite RepeatsMycobacterium bovisPhylogenyTuberculosis, Bovine

Identifiers

PMID29664901
PMCPMC5922621
OpenAlexW2801812244

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.