Evidence map›Paper›PMID 29664036›Full record

ArticleThe Indian journal of medical research2017

Genotype-phenotype relationship of CCL5 in pulmonary tuberculosis infection in

Gunja Mishra, Satish S Poojary, Sanjay Jain, Pramod Kumar Tiwari

Open access · diamondAbstract read
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Article in The Indian journal of medical research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Gunja MishraDepartment of Molecular & Human Genetics, Centre for Genomics, Jiwaji University, Gwalior, India.
Satish S PoojaryDepartment of Molecular & Human Genetics, Centre for Genomics, Jiwaji University, Gwalior, India.
Sanjay JainRevised National Tuberculosis Control Programme Unit, District Hospital, Sheopur, India.
Pramod Kumar TiwariDepartment of Molecular & Human Genetics, Centre for Genomics, Jiwaji University, Gwalior, India.
Jiwaji University · INNational Tuberculosis Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND &

objectivesSahariya, a primitive tribe of Central India, has shown significantly increased incidence of pulmonary tuberculosis (PTB). Our previous study on Sahariya showed a significant association of -403G>A single nucleotide polymorphism (SNP) of CCL5 with susceptibility to PTB. Hence, this study was aimed to analyze a genotype-phenotype relationship of this disease-associated SNP to develop a potential diagnostic marker for TB in this tribe.

methodsThe present study was carried out on 70 plasma samples from Sahariya tribe, wherein the plasma CCL5 level was determined using a commercially available ELISA kit.

resultsThe level of CCL5 decreased significantly in patients who were on therapy/completed their therapy [inactive TB patient/inactive PTB (IPTB)], particularly with AA genotype of -403G>A (P=0.046). The level, with AA genotype, was also found to gradually decrease in sputum 3+ and 1+/2+ than in sputum-negative samples. Similarly, the CCL5 level was found to be higher in sputum-positive/active TB patients than in IPTB group and healthy controls. INTERPRETATION &

conclusionsOur results suggested that the CCL5 level was influenced collectively not only by the genotypes of -403G>A SNP and bacillary load but also by the treatment. Thus, CCL5 may be considered for the development of a diagnostic marker and also as an indicator of recovery.

Indexed as

Genetic Predisposition to DiseaseAdultChemokine CCL5FemaleGenetic Association StudiesGenotypeHaplotypesHumansMaleMiddle AgedPhenotypePolymorphism, Single NucleotideSputumTuberculosis, PulmonaryCCL5 protein, humanChemokine CCL5CCL5 - resistance - Sahariya - susceptibility - tuberculosis

Identifiers

PMID29664036
PMCPMC5926349
OpenAlexW2797019778

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.