Evidence map›Paper›PMID 29664013›Full record

ArticleThe Journal of clinical investigation2018

β-Catenin-mediated immune evasion pathway frequently operates in primary cutaneous melanomas.

Jérémie Nsengimana, Jon Laye, Anastasia Filia, Sally O'Shea, Sathya Muralidhar, Joanna Poźniak, Alastair Droop, May Chan, Christy Walker, Louise Parkinson and 8 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 1 pooled it
4.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 1 synthesis or guideline pooled it, 94 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. LncRNAEpigenetics · 2026
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  6. Functional characterization of the 9q34.13 locus identifiesbioRxiv : the preprint server for biology · 2026
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  8. Article
  9. Review
  10. Article
  11. Article
  12. Development of mutated β-catenin gene signature to identifyJHEP reports : innovation in hepatology · 2024
    Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 1 institution in 1 country.

Jérémie NsengimanaLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Jon LayeLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Anastasia FiliaLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Sally O'SheaLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Sathya MuralidharLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Joanna PoźniakLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Alastair DroopLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
May ChanLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Christy WalkerLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Louise ParkinsonLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Joanne GascoyneLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Tracey MellLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Minttu PolsoLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Rosalyn JewellLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Juliette Randerson-MoorLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Graham P CookLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
D Timothy BishopLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Julia Newton-BishopLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
University of Leeds · GB

Funding

Cancer Research UK 10589Cancer Research UK 11963Cancer Research UK 19167Medical Research Council G0802123Medical Research Council MR/L01629X/1Medical Research Council MR/M019012/1Medical Research Council MR/S00386X/1
6 · The paper itself

Abstract

Immunotherapy prolongs survival in only a subset of melanoma patients, highlighting the need to better understand the driver tumor microenvironment. We conducted bioinformatic analyses of 703 transcriptomes to probe the immune landscape of primary cutaneous melanomas in a population-ascertained cohort. We identified and validated 6 immunologically distinct subgroups, with the largest having the lowest immune scores and the poorest survival. This poor-prognosis subgroup exhibited expression profiles consistent with β-catenin-mediated failure to recruit CD141+ DCs. A second subgroup displayed an equally bad prognosis when histopathological factors were adjusted for, while 4 others maintained comparable survival profiles. The 6 subgroups were replicated in The Cancer Genome Atlas (TCGA) melanomas, where β-catenin signaling was also associated with low immune scores predominantly related to hypomethylation. The survival benefit of high immune scores was strongest in patients with double-WT tumors for BRAF and NRAS, less strong in BRAF-V600 mutants, and absent in NRAS (codons 12, 13, 61) mutants. In summary, we report evidence for a β-catenin-mediated immune evasion in 42% of melanoma primaries overall and in 73% of those with the worst outcome. We further report evidence for an interaction between oncogenic mutations and host response to melanoma, suggesting that patient stratification will improve immunotherapeutic outcomes.

Indexed as

Mutationbeta CateninFemaleGTP PhosphohydrolasesHumansMaleMelanomaMembrane ProteinsProto-Oncogene Proteins B-rafSkin NeoplasmsTumor Microenvironmentbeta CateninBRAF protein, humanGTP PhosphohydrolasesMembrane ProteinsNRAS protein, humanProto-Oncogene Proteins B-rafCancer immunotherapyExpression profilingImmunologyMelanomaOncology

Identifiers

PMID29664013
PMCPMC5919828
OpenAlexW2792414950

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.