Evidence map›Paper›PMID 29663699›Full record

ArticleMicrobial biotechnology2018

Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.

Estrella Duque, Abdelali Daddaoua, Baldo F Cordero, Zulema Udaondo, Carlos Molina-Santiago, Amalia Roca, Jennifer Solano, Eduarda Molina-Alcaide, Ana Segura, Juan-Luis Ramos

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Thermotolerant class A acid phosphatase active across broad pH range and diverse substrates.Protein science : a publication of the Protein Society · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Estrella DuqueEstación Experimental del Zaidín (CSIC), Calle Profesor Albareda, 1, 18008, Granada, Spain.ORCID 0000-0002-4857-8974
Abdelali DaddaouaEstación Experimental del Zaidín (CSIC), Calle Profesor Albareda, 1, 18008, Granada, Spain.
Baldo F CorderoDepartment of Biotechnology, Abengoa Research, Campus Palmas Altas, Avenida de la Energia 1, 41014, Seville, Spain.
Zulema UdaondoEstación Experimental del Zaidín (CSIC), Calle Profesor Albareda, 1, 18008, Granada, Spain.
Carlos Molina-SantiagoEstación Experimental del Zaidín (CSIC), Calle Profesor Albareda, 1, 18008, Granada, Spain.
Amalia RocaBioIliberis R&D, Polígono Juncaril, Calle Capileira 7, 18220, Albolote, Granada, Spain.
Jennifer SolanoBioIliberis R&D, Polígono Juncaril, Calle Capileira 7, 18220, Albolote, Granada, Spain.
Eduarda Molina-AlcaideEstación Experimental del Zaidín (CSIC), Calle Profesor Albareda, 1, 18008, Granada, Spain.
Ana SeguraEstación Experimental del Zaidín (CSIC), Calle Profesor Albareda, 1, 18008, Granada, Spain.
Juan-Luis RamosEstación Experimental del Zaidín (CSIC), Calle Profesor Albareda, 1, 18008, Granada, Spain.
Abengoa (Spain) · ESBioiliberis Research and Development (Spain) · ESEstación Experimental del Zaidín · ESUniversidad de Granada · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The success of second-generation (2G) ethanol technology relies on the efficient transformation of hemicellulose into monosaccharides and, particularly, on the full conversion of xylans into xylose for over 18% of fermentable sugars. We sought new hemicellulases using ruminal liquid, after enrichment of microbes with industrial lignocellulosic substrates and preparation of metagenomic libraries. Among 150 000 fosmid clones tested, we identified 22 clones with endoxylanase activity and 125 with β-xylosidase activity. These positive clones were sequenced en masse, and the analysis revealed open reading frames with a low degree of similarity with known glycosyl hydrolases families. Among them, we searched for enzymes that were thermostable (activity at > 50°C) and that operate at high rate at pH around 5. Upon a wide series of assays, the clones exhibiting the highest endoxylanase and β-xylosidase activities were identified. The fosmids were sequenced, and the corresponding genes cloned, expressed and proteins purified. We found that the activity of the most active β-xylosidase was at least 10-fold higher than that in commercial enzymatic fungal cocktails. Endoxylanase activity was in the range of fungal enzymes. Fungal enzymatic cocktails supplemented with the bacterial hemicellulases exhibited enhanced release of sugars from pretreated sugar cane straw, a relevant agricultural residue.

Indexed as

AnimalsBacteriaBacterial ProteinsBiofuelsCattleCloning, MolecularEndo-1,4-beta XylanasesEnzyme StabilityGlycoside HydrolasesMetagenomicsOpen Reading FramesPolysaccharidesRumenSaccharumBacterial ProteinsBiofuelsEndo-1,4-beta XylanasesGlycoside HydrolaseshemicellulasehemicellulosePolysaccharides

Identifiers

PMID29663699
PMCPMC6011990
OpenAlexW2801779904

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.