Evidence map›Paper›PMID 29662059›Full record

ArticleNature communications2018

Genome-wide association study of depression phenotypes in UK Biobank identifies variants in excitatory synaptic pathways.

David M Howard, Mark J Adams, Masoud Shirali, Toni-Kim Clarke, Riccardo E Marioni, Gail Davies, Jonathan R I Coleman, Clara Alloza, Xueyi Shen, Miruna C Barbu and 12 more

Erratum issuedAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 256 papers, 13 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
256citing papers in PubMed, 13 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

256 citing papers in PubMed, 13 syntheses or guidelines pooled it.

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  14. Article
  15. Genetic architectures of brain-related traits are shaped by strong selective constraints.Proceedings of the National Academy of Sciences of the United States of America · 2026
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196 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors.

David M HowardDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK. D.Howard@ed.ac.uk.ORCID http://orcid.org/0000-0002-6005-1972
Mark J AdamsDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK.ORCID http://orcid.org/0000-0002-3599-6018
Masoud ShiraliDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK.ORCID http://orcid.org/0000-0002-5401-0541
Toni-Kim ClarkeDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK.
Riccardo E MarioniCentre for Cognitive Ageing and Cognitive Epidemiology, University of Edinburgh, Edinburgh, EH8 9JZ, UK.
Gail DaviesCentre for Cognitive Ageing and Cognitive Epidemiology, University of Edinburgh, Edinburgh, EH8 9JZ, UK.
Jonathan R I ColemanSocial Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London, SE5 8AF, UK.ORCID http://orcid.org/0000-0002-6759-0944
Clara AllozaDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK.
Xueyi ShenDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK.ORCID http://orcid.org/0000-0002-0538-4774
Miruna C BarbuDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK.
Eleanor M WigmoreDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK.
Jude GibsonDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK.
23andMe Research Team
Saskia P HagenaarsSocial Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London, SE5 8AF, UK.
Cathryn M LewisSocial Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London, SE5 8AF, UK.ORCID http://orcid.org/0000-0002-8249-8476
Joey WardInstitute of Health and Wellbeing, University of Glasgow, Glasgow, G12 8RZ, UK.
Daniel J SmithInstitute of Health and Wellbeing, University of Glasgow, Glasgow, G12 8RZ, UK.ORCID http://orcid.org/0000-0002-2267-1951
Patrick F SullivanDepartment of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, 171 77, Sweden.
Chris S HaleyMedical Research Council Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, EH4 2XU, UK.ORCID http://orcid.org/0000-0002-9811-0210
Gerome BreenSocial Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London, SE5 8AF, UK.
Ian J DearyCentre for Cognitive Ageing and Cognitive Epidemiology, University of Edinburgh, Edinburgh, EH8 9JZ, UK.
Andrew M McIntoshDivision of Psychiatry, University of Edinburgh, Edinburgh, EH10 5HF, UK.ORCID http://orcid.org/0000-0002-0198-4588

Funding

1/7 Psychiatric Genomics Consortium: Finding actionable variationU01MH109528 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN, PATRICK F · 2016 to 2020
$2.5M
Medical Research Council MC_PC_17228Medical Research Council MC_PC_U127592696Medical Research Council MC_QA137853Medical Research Council MC_UU_00007/10Medical Research Council MR/K026992/1Medical Research Council MR/S015132/1NIMH NIH HHS U01 MH109528Wellcome Trust
6 · The paper itself

Abstract

Depression is a polygenic trait that causes extensive periods of disability. Previous genetic studies have identified common risk variants which have progressively increased in number with increasing sample sizes of the respective studies. Here, we conduct a genome-wide association study in 322,580 UK Biobank participants for three depression-related phenotypes: broad depression, probable major depressive disorder (MDD), and International Classification of Diseases (ICD, version 9 or 10)-coded MDD. We identify 17 independent loci that are significantly associated (P < 5 × 10

Indexed as

Genetic Predisposition to DiseasePhenotypeBiological Specimen BanksBiomarkersCohort StudiesDepressionGene Expression RegulationGenetic LociGenome-Wide Association StudyHumansInternational Classification of DiseasesLinkage DisequilibriumMajor Depressive DisorderMechanotransduction, CellularNerve Tissue ProteinsSynapsesBiomarkersNerve Tissue Proteins

Identifiers

PMID29662059
PMCPMC5902628

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.